Gene Cpin_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4284 
Symbol 
ID8360457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5344715 
End bp5345413 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content44% 
IMG OID644966446 
Productnitroreductase 
Protein accessionYP_003123934 
Protein GI256423281 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0793734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0844762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAC TGGATGATTT ACATTGGCGC TACGCTACCA AAAAGATGAA CGGAGTATCC 
GTACAACAGG AAAAACTGGA TTATATTTTA GAAGCAGCCC GCCTGGCGCC TTCCTCCTCC
GGTTTGCAGC AGTATAAAGT AATAGTAATA AGCGATAAAG CTTTGCTGGA AAAAATAAAG
CGTATTGCTT ATGATCAAAG TCAGATAACA GATTGCTCGC ATCTGCTTGT ATTTGCAGCC
TGGGATGGAT ATAGCGAAGA ACGGGTAAGC CAGGTATTTA ACTACATGAT GGATGAACGG
GGATTACCAC GTGATACGAT GGATGGCTAT AAAGACACCA TTTTAGGGCT TTACGGTCCA
TTGGGACAAG AATGGCAGGC ACATCATGCT GCCAAGCAAA GCTATATCTC TTTTGGTCTG
GCGATCGCTG CAGCAGCAGA GCAAAAAGTG GATGCTACCC CGATAGAAGG CTTCTTGCCT
GACAAGCTGG ATGAATTATT ACAGTTAAAA GGAACGGGCT ATAAAAGCAC TGTATTATTG
CCATTGGGTT ATCGCGAAGC TGAAAACGAC TGGTTGGTGA ATATGAAAAA AGTGCGTACA
CCGAAGGCCG CCTTTGTCAC TGAAATGACT ATAGCAGACG CAGCAGTGCT CAGTGATCTT
CCGGTAATGC AATCGTTGGG TAGCTTTACC AGGAAGTAA
 
Protein sequence
MSLLDDLHWR YATKKMNGVS VQQEKLDYIL EAARLAPSSS GLQQYKVIVI SDKALLEKIK 
RIAYDQSQIT DCSHLLVFAA WDGYSEERVS QVFNYMMDER GLPRDTMDGY KDTILGLYGP
LGQEWQAHHA AKQSYISFGL AIAAAAEQKV DATPIEGFLP DKLDELLQLK GTGYKSTVLL
PLGYREAEND WLVNMKKVRT PKAAFVTEMT IADAAVLSDL PVMQSLGSFT RK