Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4284 |
Symbol | |
ID | 8360457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5344715 |
End bp | 5345413 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966446 |
Product | nitroreductase |
Protein accession | YP_003123934 |
Protein GI | 256423281 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0793734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0844762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAC TGGATGATTT ACATTGGCGC TACGCTACCA AAAAGATGAA CGGAGTATCC GTACAACAGG AAAAACTGGA TTATATTTTA GAAGCAGCCC GCCTGGCGCC TTCCTCCTCC GGTTTGCAGC AGTATAAAGT AATAGTAATA AGCGATAAAG CTTTGCTGGA AAAAATAAAG CGTATTGCTT ATGATCAAAG TCAGATAACA GATTGCTCGC ATCTGCTTGT ATTTGCAGCC TGGGATGGAT ATAGCGAAGA ACGGGTAAGC CAGGTATTTA ACTACATGAT GGATGAACGG GGATTACCAC GTGATACGAT GGATGGCTAT AAAGACACCA TTTTAGGGCT TTACGGTCCA TTGGGACAAG AATGGCAGGC ACATCATGCT GCCAAGCAAA GCTATATCTC TTTTGGTCTG GCGATCGCTG CAGCAGCAGA GCAAAAAGTG GATGCTACCC CGATAGAAGG CTTCTTGCCT GACAAGCTGG ATGAATTATT ACAGTTAAAA GGAACGGGCT ATAAAAGCAC TGTATTATTG CCATTGGGTT ATCGCGAAGC TGAAAACGAC TGGTTGGTGA ATATGAAAAA AGTGCGTACA CCGAAGGCCG CCTTTGTCAC TGAAATGACT ATAGCAGACG CAGCAGTGCT CAGTGATCTT CCGGTAATGC AATCGTTGGG TAGCTTTACC AGGAAGTAA
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Protein sequence | MSLLDDLHWR YATKKMNGVS VQQEKLDYIL EAARLAPSSS GLQQYKVIVI SDKALLEKIK RIAYDQSQIT DCSHLLVFAA WDGYSEERVS QVFNYMMDER GLPRDTMDGY KDTILGLYGP LGQEWQAHHA AKQSYISFGL AIAAAAEQKV DATPIEGFLP DKLDELLQLK GTGYKSTVLL PLGYREAEND WLVNMKKVRT PKAAFVTEMT IADAAVLSDL PVMQSLGSFT RK
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