| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4283 |
|---|
| Symbol | |
|---|
| ID | 8360456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5344228 |
|---|
| End bp | 5344599 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644966445 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003123933 |
|---|
| Protein GI | 256423280 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.130583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0318245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAG TGAACTTAAT ATATCCCGGC GACAGCGATT GTATAAAAAG AATGAGGGCT
ATTGATGATA CTATACACAT CTTTAGCGGC AAATGGAAAT TAGCTATCAT CTCACATCTC
TGTGCCAGAC AAATGCGATA TTCAGAATTG TTGAAAGATA TCAATGGTAT TGCAGGAAAG
GTATTAAGCC GGGAATTAAA AGACCTGGAA ATGAATGGGC TTATTATCAG AGAAGTAACT
ACAGGTAGCC CTGTCGCAGT TTCTTATGTT CTTTCCGACT ACGGTAAGAC GCTAAAGGTC
TTAATTGATG CCATGGCAGA GTGGGGGCTG AAACACCGGG AAAAGATATT TGGAAAACAG
CTGGTCCAAT AA
|
|---|
| Protein sequence | MQKVNLIYPG DSDCIKRMRA IDDTIHIFSG KWKLAIISHL CARQMRYSEL LKDINGIAGK
VLSRELKDLE MNGLIIREVT TGSPVAVSYV LSDYGKTLKV LIDAMAEWGL KHREKIFGKQ
LVQ
|
|---|
| |