| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4275 |
|---|
| Symbol | |
|---|
| ID | 8360448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5338000 |
|---|
| End bp | 5338611 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644966437 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003123925 |
|---|
| Protein GI | 256423272 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.18004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGG AACTTCAGCA ACTTTACGGA AACATAGACA TCTACCTCTT TGATCAACTG
CTTAAAGGAA CATACGATAA ATGTAAAAGT GTACTAGATG CGGGCTGCGG TGGCGGTCGC
AACCTGATCT ACTTCTTAAA AAACGGCTAT GATGTGTATG GTATTGACCC TAATCCCAAT
GCCGTGGAGG CAGTCAGGCA ACTATCAGCA ACGCTATCCC ATACAAATGC TACAGAAAAT
TTTGTGGTCG CTTCCGCTGA AAATCTGCCT TTTGAGGATA ACACTTTTGA CCTGATAATC
AGCAGCGCAG TATTACACTT CGCCCAGGAT CCTGCTCATT TCCAGGACAT GATCTATTCA
ATGTGGCGGG TACTGAAACC TGGCGGCTAT TTATTTGCCA GACTAGCCTC AGACATCGGA
ATTGAAACGC AGGTACAAGA CCTGGGTAAT GGTCGCTATC TTTTGCCCGA TGGCAGCGAA
CGCTTTTTGG TGAGTCAACA ATTACTACTT CAATATACAG AACGCCTCAA CGCGCGGCTC
CATGAACCTA TAAAAACCAC CAATGTGCAG AACTTGCGAT GCATGACTAC CTGGTGTTTG
CAGAAAGTGT AA
|
|---|
| Protein sequence | MQAELQQLYG NIDIYLFDQL LKGTYDKCKS VLDAGCGGGR NLIYFLKNGY DVYGIDPNPN
AVEAVRQLSA TLSHTNATEN FVVASAENLP FEDNTFDLII SSAVLHFAQD PAHFQDMIYS
MWRVLKPGGY LFARLASDIG IETQVQDLGN GRYLLPDGSE RFLVSQQLLL QYTERLNARL
HEPIKTTNVQ NLRCMTTWCL QKV
|
|---|
| |