Gene Cpin_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4249 
Symbol 
ID8360422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5312016 
End bp5313128 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content44% 
IMG OID644966415 
Productmonooxygenase FAD-binding 
Protein accessionYP_003123903 
Protein GI256423250 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.850855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC ATGTTTTAAT ATCAGGAGCC AGCTTTGCAG GACTAACACT GGCTTACTGG 
TTAAATAAGT CCGGTTTTAA GGTAACTGTA GTTGAATTAG GAGGGGACCT GAGAACCGCC
GGCTCACCAA TCGATGTGCG TGGTGACGCT TTAGATATAG CCAGGAAAAT GGGTATATAT
GACCAGATTA AAGCCAATGA ATTTATACAT ACAGATGAGA TTGTAGGTTC CGAAGATCAA
ACATTAGCAA AGTTTGCCAT CAACACTTTA CCGGAATATC TGGGTGATAT TGAGATTCAC
CGTGGAGACC TGGTAAAGAT CCTATATGAA GCCATTCCAA AAGATGAAGT AGCAATCATT
TTTGGCAACA GTATATCCGA TTTAAGGCAG GGGGACAATC ACGTGGAAGT GAAGTTCGAG
AACGGCGAAA GCGAAGTTTA CGATCTTGTA TTTGGTGCTG ACGGCACCCA TTCTATAGTC
AGAAAACTTG TTTTCGGACC AGAAGAAGAC TTTAAGAAGT TTCTGGGTGT TTACTTTGCA
TTTGCTGCTG CTGATCATAT TCAAACAGGC CGACCCAAAT CTACAGGTAT TGTGTATCGA
GAGTTAGGTA AACAGGCGGT GATCTTTCAG TTTAAAGAGG CAGCGAACGC CATCCTTGTA
TTCCGGGCAC CCAAGCTGGA TTGGAATTAC CGGGATCGCG AGCAGCCTAA GCAGATTTTA
AAGGATCATT TCGGCGGTAA CACCAATTGG AAAATTCCAC AAATCCTGGA TGCCATGGTT
GATGCTGATG ACTTATATTT TGACGAGGCC TGCCAGATCA AAATGCCGAC CTGGACAAAG
GGACGGGTGG CCCTGATAGG GGATGCCGCC TATGCCCCAA GCTTTTTCAC TGGGATGGGT
ACCAGCCTGG CTATGCAAGG TGCAGCGCTT TTGGCTGAGC AGCTTCAGGC TACAGACGAT
CATCAAACCG CTTTTATTAA ATATAACGAA GTATTCAAAC CTTTTGTGGA TAGTATTCAT
GCACGTGTTG ATGACTCGCT GAAAGTCCAG CTACCCGAAA CAGAGGAAGA ACTTAAAGCC
TCTATCAAAG CATGGACTAA CGATAACCAA TAG
 
Protein sequence
MRKHVLISGA SFAGLTLAYW LNKSGFKVTV VELGGDLRTA GSPIDVRGDA LDIARKMGIY 
DQIKANEFIH TDEIVGSEDQ TLAKFAINTL PEYLGDIEIH RGDLVKILYE AIPKDEVAII
FGNSISDLRQ GDNHVEVKFE NGESEVYDLV FGADGTHSIV RKLVFGPEED FKKFLGVYFA
FAAADHIQTG RPKSTGIVYR ELGKQAVIFQ FKEAANAILV FRAPKLDWNY RDREQPKQIL
KDHFGGNTNW KIPQILDAMV DADDLYFDEA CQIKMPTWTK GRVALIGDAA YAPSFFTGMG
TSLAMQGAAL LAEQLQATDD HQTAFIKYNE VFKPFVDSIH ARVDDSLKVQ LPETEEELKA
SIKAWTNDNQ