Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4245 |
Symbol | |
ID | 8360418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5308277 |
End bp | 5309056 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644966412 |
Product | protein of unknown function DUF323 |
Protein accession | YP_003123900 |
Protein GI | 256423247 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.275771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.877296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTCT CACTACTGAT AAGTTTATTC CTGCCTGATA CATCCTTTGT ACAGGTACCC GCCGGAGACT ATTGGGTCGG TGCTAAAGGG CATGCCCTTA ATCCCGCCAG ACAGGTCCAT GTAGAAACCT ACGCTATCGG TGCTACGGAA GTCACTAATC AGCAGTTTGC AGCATTTGTG GCCGCTACGT ATTATGTCAC GGATGCGGAG CGGCTACACA ATGCGATGGT CTTCGAACCA GGACTGAGGG AATTCCGCTG GCTGGAGGAC AGTACTGCCT ACTGGCGGTA TCCTAACGGC GTGAGCCGCG GTGGTATTGA AGACAAAATG CAACATCCTG TTACCACCAT CAGCTACAAT GACGTTCAAG CCTATTGCGA ATGGGCACAG GTAAGGCTCC CTTCCTTCGA AGAATGGGAG ATCGCTTCCC GCGCAGGCGC CAGAACCACC TATTTTTGGG GAGAAGATAG CCGGAAGATC GGTCGTTATG CTAATATCTG GCATGCACAT GACCACCTGG AATCAGACAG CTCCGACGGA TATATGTATA CTGCTCCTGT TGCCAGTTTC CAAGCTAATC GCTGGGGGCT ATACGACATG TATGGAAATG TATTCGAGTT TTGCGAAGGG CATCTCAAAG AGGAGAAAAC AGTACATGCC CGGGGCGGCT CATGGTGGTG TAGTCAACAC TCCTGTCACT ATTTTAACTC TGTAGATATT GGAAGAGTGC ATAGAAGGGC ATCCTTTAGT AATCAGGGCT TCAGGGTGGT CAAAAAGTGA
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Protein sequence | MIFSLLISLF LPDTSFVQVP AGDYWVGAKG HALNPARQVH VETYAIGATE VTNQQFAAFV AATYYVTDAE RLHNAMVFEP GLREFRWLED STAYWRYPNG VSRGGIEDKM QHPVTTISYN DVQAYCEWAQ VRLPSFEEWE IASRAGARTT YFWGEDSRKI GRYANIWHAH DHLESDSSDG YMYTAPVASF QANRWGLYDM YGNVFEFCEG HLKEEKTVHA RGGSWWCSQH SCHYFNSVDI GRVHRRASFS NQGFRVVKK
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