| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4241 |
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| Symbol | |
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| ID | 8360414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5302940 |
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| End bp | 5304607 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966408 |
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| Product | glycoside hydrolase family 29 (alpha-L- fucosidase) |
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| Protein accession | YP_003123896 |
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| Protein GI | 256423243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.525329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.717793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA GAACAGTAAT AAAACAATTG GGGAAGGCGT TACCAGCTAC GTTTTTGTCA
AAGAAACTTT CAGCTATATC TGCTATCAGC TTAAATATAG GGGAGAAAAT TATTGATGGA
CCATTTGCAC CTACGTGGGA ATCTTTAGCA CAATTTAAGA CACCGGAATG GTATCGTGAC
GCCAAATTTG GTATCTGGGC GCATTGGGGG CCACAGTGCC AGCCGGAGAA TGGTGATTGG
TATGCCCGTG AGATGTATAT GGAAGGGAAT CATCATTATA ATTTCCATCT GAAGAAATAT
GGCCATCCTT CAAAATTTGG GTTTAAGGAT GTGATAAATG ACTGGAAGGC TGAGCAATGG
AATCCTGAAG AGTTATTATC ACTATATCGA AGAGCTGGTG CCAAATATTT TGTAGCATTA
GCTAACCATC ATGACAATAT GGACTTATAT GACAGTAAGT ATCAGCCAGA ATGGAATAGT
GTCAAAATGG GGCCTAAAAG AGACCTGATC TCAGGATGGG CGAAAGCTGC CAGAAATCAA
GGTCTCCATT TTGGAGTCAG TGTACATGCT GCACATGCCT GGAGCTGGAT GGAGACAGCT
CAGCGGGCCG ATACAGAAGG TCCTTATGCC GGTGTACCTT ATGACGGCAA ATTGCGAAAG
TCTGAAGGCA AAAGCAAGTG GTGGAATGGC CTTGATCCCC AGGCACTTTA TGCGCAGGAT
CATCCTCTTA GCGAGAATAG TCTGGATAAT AGCATGATAC ATCGTCAATG GAACTGGGGG
AACGGTGTTT GTCCTCCAAC CCGGGCCTAT TGTGAAAAAT TCTATAATAG AACTATCGAC
CTTATCAACA GGTATGATCC GGATCTGGTA TATTTTGATG ATACCGCATT ACCATTGTGG
CCTGTAAGTG ACGCGGGATT GAGAATCGCC GCGCACTATT ACAATCGGAG CATAAAGAAC
AGGAATAAGC TGGATGTGGT AATTAATGGC AAAATATTGA ACGAAGAGCA GCGTAAATGT
ATGGTATGGG ATATTGAAAG GGGACAGAGT AATAGCATTG AACCATCATC CTGGCAGACG
GATACCTGCA TTGGCGGATG GCATTATGAC CGAAATATTT ATGAAAAACA TGGTTATAAA
AGTGCACAGA CCATCATACA AACACTTGTA GATATTGTTA GCAAGAATGG TAATTTGCTG
CTCAGTATAC CCGTACGTGG TAACGGAAGT ATTGATGAGG ACGAGCGGAA CATCGTTGAG
GAGATAGGAC AGTGGATGCG GGTCAATGGC GAGAGCATAT ATGGTACAAG GCCATGGATA
GTATATGGAG AAGGACCGTC ACTTGAAAAT GCTGTTCCTT TGAATGCACA GGGTTTTAAT
GAAGGGAAAG GCCGTCCTTT TGAAGCGACG GACATAAGGT TCACCACAAA AGGAGAGGTG
CTGTATGCTA CAGTGTTGAA ATGGCCGGAA AATGGTGAAG TGAAAATAGG GAGCCTGGCG
GGTAGCAGTA ACCTTGAGCC GCGTGAGATC CGAAAAGTGG AACTGCTGGG AGATGCAGGC
GAGTTGTTTT TTGAGCGTTC TTCTACAGCG CTCAAAATAG TTCTCCCTGA GAGACATTCG
TTATCATCTT ATGCTGTTGC TTTAAAGATA ACTATGGCTA CATCTTGA
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| Protein sequence | MNRRTVIKQL GKALPATFLS KKLSAISAIS LNIGEKIIDG PFAPTWESLA QFKTPEWYRD
AKFGIWAHWG PQCQPENGDW YAREMYMEGN HHYNFHLKKY GHPSKFGFKD VINDWKAEQW
NPEELLSLYR RAGAKYFVAL ANHHDNMDLY DSKYQPEWNS VKMGPKRDLI SGWAKAARNQ
GLHFGVSVHA AHAWSWMETA QRADTEGPYA GVPYDGKLRK SEGKSKWWNG LDPQALYAQD
HPLSENSLDN SMIHRQWNWG NGVCPPTRAY CEKFYNRTID LINRYDPDLV YFDDTALPLW
PVSDAGLRIA AHYYNRSIKN RNKLDVVING KILNEEQRKC MVWDIERGQS NSIEPSSWQT
DTCIGGWHYD RNIYEKHGYK SAQTIIQTLV DIVSKNGNLL LSIPVRGNGS IDEDERNIVE
EIGQWMRVNG ESIYGTRPWI VYGEGPSLEN AVPLNAQGFN EGKGRPFEAT DIRFTTKGEV
LYATVLKWPE NGEVKIGSLA GSSNLEPREI RKVELLGDAG ELFFERSSTA LKIVLPERHS
LSSYAVALKI TMATS
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