Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4236 |
Symbol | |
ID | 8360409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5297580 |
End bp | 5299895 |
Gene Length | 2316 bp |
Protein Length | 771 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644966403 |
Product | signal transduction histidine kinase |
Protein accession | YP_003123891 |
Protein GI | 256423238 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.931107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACG CATTATTGGT CATTTTCTTG ATTCTATTTA CAAATTCATC ACTGGCACAA ACCAGCAATC TGGATGAATT ACCTTTGTCG GAATTAAGGC AAAAACTGGC AAAAAGTGCC AATGATACGA CTAAGGTCCA GGTGCAACTG GCCCTGGGAC ATTTAATGCT TCAAAAACCT ACCCAGGACG AGAAAGACAT TGATTCAGCT GTCTCGTTCG CAACACAGGC TGCAGCACTA AGTCGCCGGC TCGACTATCA TTTTGGAATT ATTAATGCCA TGCTGCTCAG TGCAGAAACT TATTATAATC GAGGTGATCG CGAAACGGGT CTGACGACTG CTCAAAATGC GCTGACATTC TCTCAAATGC ATAGCAATAG CGATGGGGAG GGAAGATCAT ATCACCTTAT CGCCCAGTAC TACTCTATTT CTGATCCGGT CTCCCTTCAA AACAGGATCC TATATATGAG CAAGGCTATC AGTGTATTTA GAAAAAACGG GAATATTCTT TGGCTCTCCT TTTTGCTAAT GGCAAACGCC GATCTGTTAT TTAATGCAGA TCGAATTACC GAAGGACTTA GGCTATTGTT CGAAGCCTTA AATTTAGGAA AAGGAGTAAG TCGCCGAACT GTTGAGGGGA TTTACTGGAA CATCGGGAGG ATATCGTATG ATTTAGGCGA TTATAGCAAT TCCTTAAAAT ATAATATGTT GGCGATTGAG ACAGCCAAAG AAGTCAACGA TACAACGTTA CAGGTCAGTT TAATTAACCA TCTTATCGCG TCTACTTATA TTAAACTGGA GGACTATAAC AAGGCGATTC CATATGCCGT TGATGCATTA AGGCTGGCAA AGCGTTACAA CGACCGGAGC TTTATGGATG CCGGGTCTTC AATACTGGCA TTAGCATACA CCCGCACGGG CGAACTCTCT AAAGCTTTAG CACTACTCGA AGAAATGAAA AACCGGGCTG TTACTAACCC GGAAAAATTA TCGGTAACAG TGGAGCTTTT AAATAATCTG GTCTATGCAG AACGCTTCGG AGATGCTGAA AAATATGTAC AGGACGTAAC AAGTCTGTTA AAGGCAATCT CCAGTGAGAA CGTCACAGAA CGCATGAACG CCTATAACTC CCTCGCCGCC TATTATTCGG AGATAGGACA GGTGAAACAA GCTTACCGCT ATACGGAGCT GTATGCCACC ATGGCGCACA AACTAAATTA TGCAGCGGGT ATCAGAACGG CCGAATACCG TTATTATAAG CTGGTGTCAT TACAAGGAGA TACGAAGTCT GCTATGAAGC ACTTTCTTAA AGAAAAGGAG ATTAAAGATT CAATTGATAA TATCGCCAAA AACTATCAGA TCTCCCTACT TCATATTGAA AATGAGACAC TGGAAAAAAA CAGGCATATA GACTCGCTTA CCAGGGAAGC ACTGATAAGT GATATTAAAT TGAAACGTAA CCAACTTCTC CATAAGGTGA CCATTGGCGG AATTGTGTTA TTACTGATCA TTATTGCACT TATTTATAGC CGTTACAGGT TAAAACAACG CAGCAATGCG CTTTTGTTGC TTCAGAAATC TGAGATTGAC CAGCAAAATA TTTCTTTACA GCATCTGGTA TCGGACAAGA ATCAGCTCAT TGGGGAAAAA GACCTGCTAC TCAAAGAAGT GAACCACCGT GTAAAAAATA ATCTGCAGAT CGTTATGAGC CTGCTGGATA CACAATCAGA ATATGTAAAG AATGAGAAAG CACAGGAAGC GATACTGGAA AGCCAGAACC GCGTGCATGC GATCGCGTTG ATACATGATC AATTATATAA GACGGATAAC ACGACGGAGA TCAATCTTTC ATTATATATT AAAAAATTAG TTCACTCATT GAACAGTTCT TTAAATCACA GCATGAACAA GGTCGCGATA ACGTGTGAGA TCGATGAGAT CACCCTCGAT GTTTCCCAGG TGGTACCTGT AGGCATCATC TTAAATGAAA CTGTGACCAA CGCATTGAAA TATGCATTTC CTGATCATCA ACGGGGCCAT ATCAATGTCC TTGTTAAACA CGTAGGAGCC TTCATAGAGA TAAAAATCAG CGATGACGGT GTAGGATTGC CCAAAGATTT CAATCCCACA ACTTCAAATA CACTTGGGAT CACACTTTTG GAAGGATTGA TTAAACAACT GGAAGGGACT TTTTCGATCG AAAATAATCA TGGTTTGACT ATTTTTTTAA AATTTCCTTT CAAGGTCTAC AATAAACCGA CAATTGTCGA AAGGGAACGG GAGTTACCGC CCGTGTCAAA ATATGTGGCG AACTAA
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Protein sequence | MRNALLVIFL ILFTNSSLAQ TSNLDELPLS ELRQKLAKSA NDTTKVQVQL ALGHLMLQKP TQDEKDIDSA VSFATQAAAL SRRLDYHFGI INAMLLSAET YYNRGDRETG LTTAQNALTF SQMHSNSDGE GRSYHLIAQY YSISDPVSLQ NRILYMSKAI SVFRKNGNIL WLSFLLMANA DLLFNADRIT EGLRLLFEAL NLGKGVSRRT VEGIYWNIGR ISYDLGDYSN SLKYNMLAIE TAKEVNDTTL QVSLINHLIA STYIKLEDYN KAIPYAVDAL RLAKRYNDRS FMDAGSSILA LAYTRTGELS KALALLEEMK NRAVTNPEKL SVTVELLNNL VYAERFGDAE KYVQDVTSLL KAISSENVTE RMNAYNSLAA YYSEIGQVKQ AYRYTELYAT MAHKLNYAAG IRTAEYRYYK LVSLQGDTKS AMKHFLKEKE IKDSIDNIAK NYQISLLHIE NETLEKNRHI DSLTREALIS DIKLKRNQLL HKVTIGGIVL LLIIIALIYS RYRLKQRSNA LLLLQKSEID QQNISLQHLV SDKNQLIGEK DLLLKEVNHR VKNNLQIVMS LLDTQSEYVK NEKAQEAILE SQNRVHAIAL IHDQLYKTDN TTEINLSLYI KKLVHSLNSS LNHSMNKVAI TCEIDEITLD VSQVVPVGII LNETVTNALK YAFPDHQRGH INVLVKHVGA FIEIKISDDG VGLPKDFNPT TSNTLGITLL EGLIKQLEGT FSIENNHGLT IFLKFPFKVY NKPTIVERER ELPPVSKYVA N
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