Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4216 |
Symbol | |
ID | 8360389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5269341 |
End bp | 5269658 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966385 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_003123873 |
Protein GI | 256423220 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC AACAAAGACG TAGCTACGAT AAGGCCTTCA AGCAGATGGC AGTAGAACTT TATCTGAAGG GCAAAGCGGC TTCAGATGTT GCTAAAGACC TTGGTATAGG AGTCGATATG GTTCGTCGTT GGACCAGAGA GCATAATGAG AGTGGCGCAC GCAGTTTTCC TGGCAATGGG AAGCAGGATC TGACACCGGA GCAAAAGGAG ATCCAGGCTT TGAAGAAAGC ACTCAAGGAG GCGGAAATGG AAAATCAAAT CCTAAAAAAG GCGGTAACCA TCTTCTCCAA GGAAGGCAAC AAATATTCAG GTTCATAA
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Protein sequence | MSKQQRRSYD KAFKQMAVEL YLKGKAASDV AKDLGIGVDM VRRWTREHNE SGARSFPGNG KQDLTPEQKE IQALKKALKE AEMENQILKK AVTIFSKEGN KYSGS
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