Gene Cpin_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4216 
Symbol 
ID8360389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5269341 
End bp5269658 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content46% 
IMG OID644966385 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_003123873 
Protein GI256423220 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAC AACAAAGACG TAGCTACGAT AAGGCCTTCA AGCAGATGGC AGTAGAACTT 
TATCTGAAGG GCAAAGCGGC TTCAGATGTT GCTAAAGACC TTGGTATAGG AGTCGATATG
GTTCGTCGTT GGACCAGAGA GCATAATGAG AGTGGCGCAC GCAGTTTTCC TGGCAATGGG
AAGCAGGATC TGACACCGGA GCAAAAGGAG ATCCAGGCTT TGAAGAAAGC ACTCAAGGAG
GCGGAAATGG AAAATCAAAT CCTAAAAAAG GCGGTAACCA TCTTCTCCAA GGAAGGCAAC
AAATATTCAG GTTCATAA
 
Protein sequence
MSKQQRRSYD KAFKQMAVEL YLKGKAASDV AKDLGIGVDM VRRWTREHNE SGARSFPGNG 
KQDLTPEQKE IQALKKALKE AEMENQILKK AVTIFSKEGN KYSGS