Gene Cpin_4213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4213 
Symbol 
ID8360387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5266184 
End bp5267086 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content33% 
IMG OID644966383 
Producthypothetical protein 
Protein accessionYP_003123871 
Protein GI256423218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGT TTTTAACCTT AGGGATGATA CAACCTGTTA TTAATCCCGA TATTTCGTGG 
AATAGGACAC CTCCGTTTTC TTTAAATATC AATCCAATTA TAGCTGAACG AGTTTGGGAA
GAAATTAAAA CTGGATTGAT TGAAATGCTT AGAGTCGATG GAAAGCCACA CATAATATTG
ATTCCCGAAC TACATCTCCC AGTAGCTAGA ATTAATACTA TAAAATCCCT AAGTAAAAGG
CATAACGTTA TTATAATTTC TGGTATAGAC TTTCAACAGA ATCCAATAGA TAAAACTCGG
ATTCGCAATC GGGGAATAAT ATGTTTCCCC GATCAAGTTG ATACAGGTAG TCCTTCGATT
AAACTAACCT CAATGCAATT CGGAAAAACC TATTTTACAT ATATGGAAAG AAGTATGTTT
AAGAAAGAGA TTGCCAACAT AGGTAAGTGT TCTTCCGATC CTGAACAAAA CATGTATATA
TTTCAATCTC AAGATCTTGG AAATTTCGGC ATCATGATCT GTTCTGATAT ATTTGATATA
GAACGTATGG CTTTTTACCA AGGGCAAATT CATCATTTAT TTATTATTTC GTTAAACAAA
GACCTAAACA CCTATTTCGC AATGGCAGAG TCATTGACCA GACTTTTATA TTGTAATGTG
ACAATATGTA ATACAGGGTA TTATGGAGGC ACTGTATCCA TTTCTCCATA CAGTGATCCT
AATGAACGGA CTATTTACAA ATATATTGGG CAAAGAATGT TTAATAGTCA TGTTATAAAT
ATACCTCTGA AGTCACTAAA TACCGCACAA GAATTTGATT TTATAAGAGA TGACAAGGAG
AATATTAAAT TCAAAGCTTC GCCTCCTTCA TATCCCAAAA TAAAATCAAA CAATAACGCT
TGA
 
Protein sequence
MKEFLTLGMI QPVINPDISW NRTPPFSLNI NPIIAERVWE EIKTGLIEML RVDGKPHIIL 
IPELHLPVAR INTIKSLSKR HNVIIISGID FQQNPIDKTR IRNRGIICFP DQVDTGSPSI
KLTSMQFGKT YFTYMERSMF KKEIANIGKC SSDPEQNMYI FQSQDLGNFG IMICSDIFDI
ERMAFYQGQI HHLFIISLNK DLNTYFAMAE SLTRLLYCNV TICNTGYYGG TVSISPYSDP
NERTIYKYIG QRMFNSHVIN IPLKSLNTAQ EFDFIRDDKE NIKFKASPPS YPKIKSNNNA