Gene Cpin_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4202 
Symbol 
ID8360375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5253524 
End bp5254093 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID644966371 
Producthypothetical protein 
Protein accessionYP_003123860 
Protein GI256423207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.726094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACG TAAAAGACAA TATATTTATC ACCGGTGTAT CCGGTACAGT GGGTAAAAAG 
ATGAATTTCC GCGTCAGGAA AGGTAAGACA GTCGTAGCTG TTAAGCGTGG TCCTAACACG
ATACCGCCGA CAGACGAACA ACAGGAAGTA CGCGAACAAT TCGTTATAGC ATCTTTATAT
GCACAAAGCG CTATGAAAGA CCCTGTGGTG AAAGCGGAAT ATCAGAAAGT TGCCAGGGGC
GGTCAGACTG CCTACAATGC TGCTTTCAAA GATGCTGCAA AACCACCAGT AATTGATAGC
GTGGGTATAA ACACTTATAA GGGAGTTATC GGAGATGTGA TAAAAATCTC CGCCAGAGAT
GTCATCACCC CTAAATCCGT AACAGTAACC ATCTCCTCAC CGACGGGAAC TGTATTAGAA
CAAGGTGATG CCATCATCGA TGCAACTAAC CAACGCATCT GGACCTACAC GGCAACCGTC
GCCAACGCGA CATTACCCGG TACTCGCATC GTAGCTACCG CAACAGACTT GCCTGGAAAC
GTCACAGAGA AGGAAGTTGT CATCTCCTAA
 
Protein sequence
MAYVKDNIFI TGVSGTVGKK MNFRVRKGKT VVAVKRGPNT IPPTDEQQEV REQFVIASLY 
AQSAMKDPVV KAEYQKVARG GQTAYNAAFK DAAKPPVIDS VGINTYKGVI GDVIKISARD
VITPKSVTVT ISSPTGTVLE QGDAIIDATN QRIWTYTATV ANATLPGTRI VATATDLPGN
VTEKEVVIS