| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4188 |
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| Symbol | |
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| ID | 8360361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5234898 |
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| End bp | 5237627 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966357 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003123846 |
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| Protein GI | 256423193 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0297646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0625599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAA CAGGTCTTTT ATGCTTCCTG CTCGGATTGT CCGTTGCGGA TACTGCCGCA
CAGACAAAGG TAGATTCACT ACTCTGTGAG AATCGCCATA ATCCGGAGGG AGTCGATGTA
ACCCATCCTC TTTTCAGCTG GCAATTATCC GGCAGCAGGC GAAATATCCG GCAGTCTGCT
TACGAACTCA GGGCAGGCAC TTCCCCCAAA CAATTAAACC AGGGCAAAGA ACTGGTCTGG
CAAAGTGGTA AAATCACCTC TGATCAGTCC ATACACGTCC CTTACCAGGG CGATGCGCTC
TCCTCCGGTA AGAAGTACTA CTGGCAGGTA AGGGTCTGGG ATGAAAGTGG TCGTGCTTCT
GACTGGAGCC CGGTAGCACA GTGGCAGATG GCCCTTTTAC AGTCGTCCGA CTGGAAAGCA
AGCTGGATAG AGCCCGGTGT TAAACTGGAC AGTCTGACAA GGCCCAGTCC CCTGTTCCGC
AAAACCTTCA ATGCGGGGAA AAAGATACAG TCCGCCACTG CCTATGTCAC GGCCCGTGGT
CTTTATGAAG CCTGTATCAA CGGCAAACGT GTCGGGGATG CTTTTCTGAC ACCTGGCTGG
ACCACTTACC GCAAAAGATT ACAGTATCAG CAATATGATG TGACCGATCT GTTACGCCAG
GGCGATAATG CCATCGGTGT TACGCTGGGG GTTGGCTGGT ACAGCGGTTA TCTCGCCTGG
GGAGATAGCA GGAACCACTT CGGCTCACGC ATCGGCTTAC TTTTTCAACT GAATATCCAA
TATACGGATG GTACGGAGGA AGTAATCACT TCCGATAACA GCTGGAAGTC ATCTACCGGC
AGCATCCTTT ATTCCGAGAT CTATCATGGA GAGACGATCG ATGCCCGCAA AGAAAAGCAG
GGCTGGTGCA ATCCTGATTA TAATGACAAA AACTGGGCAG GGGTACAGTT AAGTCCTGAT
ACGACTAAAA GTACCCTGAT ATCCACGATC AACGAGCCTA TCAGGAAACA CGAACAAATT
AAACCACTTA AAATACTCAC TACGCCGGCA GGTGAAAAGG TGATCGATTT TGGTCAGAAC
CTCGTGGGAT GGGTACAGGT ACGCGTCAAT GGACGTGCAG GAGACAGTAT CGTACTGCAA
CATGCGGAAG TACTGGACAA AGCGGGTAAT TTCTATACAG AGAACCTGCG TCTGGCCAAA
CAGAAAAATA CTTACATTTT TAAAGGGAAT GGCATAGAAC AGTTTGAGCC GCATTTCACT
TTCCAGGGTT TTCGTTTTGT GAAAATAACA GGTTATAAAG GCGTTATCAA GCCGGAGGAC
TTTACCGCTA TCGTGCTTTA TTCTGACATG CCTGCAACAG GTTCTTTCAG CTGTTCTAAT
GCATTGATCA ACCAGTTACA GCATAATATC CAATGGGGAC AACAGGGCAA CTTCCTGGAT
GTACCGACAG ATTGTCCGCA ACGTGATGAA CGACTGGGCT GGACCGGCGA TGCGCAGGCA
TTCTCCAGAA CGGCTGCCTT TAACCGTCAG GTCAATAACT TCTTTGCCAA ATGGCTGAAA
GACGTCGCAG CAGATCAGCG GGCAGATGGC AGCGTACCTT TTGTTGTACC AAACGTCCTC
GGAAATGATG CTATGGGTTC TGCCGGCTGG GCGGATGTAG CTACCATCGT ACCCTGGAAT
ATGTACCTGG CTTACGATGA TAAACGCCTC CTGGAACAAC AGTACCCCAG TATGAAATCA
TGGGTGGAGT ACATCCATAA GAACAGTCCG AAGGACTTAT GGAATACCGG TTTCCATTTC
GGCGACTGGC TCTTCTACCG TCCCGATGAT GATAATGACG GCAGGGCCGC TATTACCGAT
AAATACCTGA TCGCGCAGTG TTTCTATGCA CATTCCACAC AATTGTTGAT CAATGCGGCC
AAAGTACTAG GTAAACAGGC TGACGTAGAT ACCTATACGG CGCTTTTACA GCGGATCAAA
ACAGCTTTTG GTAAAGAATA TCTGACGCCT AACGGTCGAC TGGTATCCAG TTCGCAAACC
GCCTACGTAC TGGCCCTGAA CTTCGATATG TTGCCGGAAA ACCTGCGTGC ACAGGCAGCC
GGCCGTCTGG CAGAAAATAT CAAAAGTTAT AATACACACT TAACTACCGG TTTCCTTGGT
ACACCCTACC TGTGTCATGT GCTGAGCCGT TTTGGTTATA CGGATCTGGC TTATTCCCTG
TTATTGCAGG AAAGCTATCC TTCCTGGTTG TACCCCGTAA AAATGGGTGC TACTACGATC
TGGGAAAGAT GGAATGGAGA AAAGCCCGAT CATACCTTTG AAACACCGGG TATGAATTCC
TTCAATCACT ATGCATACGG CGCTATCGGT GACTGGATGT ACAGAGTGAT CGCAGGTATA
GATACGAAAG AAGAGATGCC TGGTTACAAG CATATCACCA TTGCGCCACA TCCCGGAGGT
ACGCTGACCC AGGTTTCCGC TAATCTGCTG ACTTATTACG GAATGATCAG TTCTTCCTGG
AAGCTCGAAA ACGGACAATT ATCACTGGAT GTGGAGATTC CGGCAAACAC AAAAGCGACG
GTATATATAC CGGTGAAAGA AGGGAATAAA GTACTGGAAG GCGGACAGCC TGTTGCCAGT
CAGAAAGATA TTAAAGTGGC CGGTACAGAT AAAGGTGTGA CGACACTGGA AGTCGGTTCC
GGACAATATC ATTTTGTAGT AGGAAGTTGA
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| Protein sequence | MYKTGLLCFL LGLSVADTAA QTKVDSLLCE NRHNPEGVDV THPLFSWQLS GSRRNIRQSA
YELRAGTSPK QLNQGKELVW QSGKITSDQS IHVPYQGDAL SSGKKYYWQV RVWDESGRAS
DWSPVAQWQM ALLQSSDWKA SWIEPGVKLD SLTRPSPLFR KTFNAGKKIQ SATAYVTARG
LYEACINGKR VGDAFLTPGW TTYRKRLQYQ QYDVTDLLRQ GDNAIGVTLG VGWYSGYLAW
GDSRNHFGSR IGLLFQLNIQ YTDGTEEVIT SDNSWKSSTG SILYSEIYHG ETIDARKEKQ
GWCNPDYNDK NWAGVQLSPD TTKSTLISTI NEPIRKHEQI KPLKILTTPA GEKVIDFGQN
LVGWVQVRVN GRAGDSIVLQ HAEVLDKAGN FYTENLRLAK QKNTYIFKGN GIEQFEPHFT
FQGFRFVKIT GYKGVIKPED FTAIVLYSDM PATGSFSCSN ALINQLQHNI QWGQQGNFLD
VPTDCPQRDE RLGWTGDAQA FSRTAAFNRQ VNNFFAKWLK DVAADQRADG SVPFVVPNVL
GNDAMGSAGW ADVATIVPWN MYLAYDDKRL LEQQYPSMKS WVEYIHKNSP KDLWNTGFHF
GDWLFYRPDD DNDGRAAITD KYLIAQCFYA HSTQLLINAA KVLGKQADVD TYTALLQRIK
TAFGKEYLTP NGRLVSSSQT AYVLALNFDM LPENLRAQAA GRLAENIKSY NTHLTTGFLG
TPYLCHVLSR FGYTDLAYSL LLQESYPSWL YPVKMGATTI WERWNGEKPD HTFETPGMNS
FNHYAYGAIG DWMYRVIAGI DTKEEMPGYK HITIAPHPGG TLTQVSANLL TYYGMISSSW
KLENGQLSLD VEIPANTKAT VYIPVKEGNK VLEGGQPVAS QKDIKVAGTD KGVTTLEVGS
GQYHFVVGS
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