| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4176 |
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| Symbol | |
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| ID | 8360349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5218676 |
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| End bp | 5221936 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966345 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003123834 |
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| Protein GI | 256423181 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.83694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0436959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA CCACGTTCCT GCTACTGGTG ATCATCTTAC AGGTGAGTGC CGCAGGATAT
TCCCAGAAAG TGACGCTGAC GGCCAGGAAT ATGCCGCTCC GCGATGTGTT TACCGAAATC
ATCACACAGA CAGGCGTATC CATCGTATAT TCTGAAAGTG TACTGGCCAA TACGGCCCCC
GTCACTTTCC GTGTGAAAGA CGCCTCCGTC CGTGAAGTAC TCGACCTCTG CCTCCACAAT
CAGCAGGTCA TCTACGCACT CGAAGGAAAG AACTTTGTCA TAAAGAAAAC GATACCGCCA
CCTGCCGGAA CCTCTCCTCA GGCAGATACG ACCATTACCA TCAGGGGGAC TGTCAGCGCT
GCCGCCGGAG GACCATTACC TGGCGCCACC GTACTGGTCA AGGGTACCCG GAAAGGCACC
CAGACCAACG GAGAAGGGCA ATTTACCTTA TCTGGTGTAC GCAAACAGGA CATCCTGATC
ATCAGCAACA TTGGATTTAC CACCCGGGAA GTCGCTGCAA CTGAACAGGT CACACTGCAA
CTGGAAGAAG ATACCCGCAA CTTCAATGAA GTCATCGTAG TGGGTTATAG CGACAAAAAG
AAAAGTGAAC TGACCAGCGC CGTAAGTGTG GTATCTGCTG AAAAACTTAA AGATGTTACC
ACCAATGATG TCGGTAGCAT GTTACAGGGT AAAGTTGCTG GGCTGCAGGT AGTGAACAGT
TCCGGTGTGC CTGGTACAGC TGCCGAACTA CGACTCCGTG GTGTGTCTTC TGTGAATGCC
TCCCAAACGC CGCTCTTTGT TGTAGACGGT ATCATCGGCG GTAACTACGA CCCGAATGAC
GTAGAAAGCA TTACCGTTCT GAAAGATGCC GGTGCTACCG CGATGTATGG TTCGCAGGCA
AATGCAGGTG TCATCATCAT CACTACTAAA AAGGCAAAAC TGGGGAAGAC GCGTTTTGAA
GCAAAGGTCA CTACCGGCTT CCGTAAACCG GATTTCGGGA AGATGGAAAT GATGAATGGC
AGCGAACTGT ATGAGCGCCA TAAAGAGTTT TACCGGGACT ATATCCCCGG CACCGATAAT
AACTCCTATA AAGTAGATAT CCTGAAATTC TACGCAGAAA GACCCAAAAC ACTGCAACAA
CAGAACTACA ACTGGCTGAC TACCATGTTC GGCACTGCTC CCGTAGAGAA TGTCTATATC
TCTGCCAGTG GTACTTCTGA AAAAAGTGAA TACTATACCG GCCTATCGTA TTATAATGAA
AGAGGTACTT TCATGAATAC AGGCTTCCAG CGTATCAACC TGCGTGGTAA CTCCACCTAC
CATTTCTCCA AAAATGTAAG CGTTACCAAT AATATCAATA TCAGCGGTTC CACGGGCAAC
AGCTACAACT ATGAGGATGT TTACTATGCT TATCTGAATA TGCCCTGGGA CAATCCTTAT
GACGCCAATC GTAACCCGGT ATATGTAGAC GGTAATGTTG GTTTTAAATG GTGGTCCAGG
GATAAGGTGA ATCCTATCCA TACCATCAAA AACTCCAACC ACCCTTATAA AAACTTTGAC
GTCAACTACG ACCTCGGACT GAATATCAAT ATCACCGACT GGCTGTCTTT TTCCAGCAGT
AACCGCGCAG CTGTCAGCTA TAACAAAGGA TCTGACTATT ATTCTCCGGT TGTCGCCGGT
TTGTATAACA GCACCGGTTA CCTGAATGAA CTCAGCACCT TGTCATATGG CGTTATCTCC
AACGACCTGC TGAAATTCAA TTTCCACAAG GGAGATCATA CCATCAGTGG TCTGGCAGGT
ATTGCGATTG AAAACAGCAA AACAGAAATA TTGGGCGCTT CCGGTAAAGG ATTGCCTGAA
GGCTTATCTG TGCTGAACGT TGTATCCAAC AACCAGCTGG TAACCGGTTC TTATGACCAG
GCTATCATCC AGTCGTTTAT CTCGCAGCTC AGTTATGGCT ATAAGGACAA ATACTTCCTC
ACAGGTTCCT ACCGTGTAGA TGGATCAACC GCTTTCCCGG CCAGCAAACG TTATGGTTCT
TTTCCGGCAG TATCTGCTGC CTGGCAGATC AGTCATGAAG ATTTCCTGCT GCACAGCAGG
CTATTCAGCA ACCTGAAAGT ACGTGCCAGT TATGGCGTGA CAGGTACACA GGATATAGGC
TCTTCCCGTT ACCTGGGATT GTATGCGTTA AGCAGCCAGT ATAATGGTGG AACAGCGGCG
ACGCCTTCTC AGTTGCCAAG CCCGAACCTG ACATGGGAGA GTAAAAGGCA ACTGAACGCC
GGACTGGATA TCGGCTTATT TAACCGCATC AACCTGACGA TCGATGCTTA TAATAACGTG
ACGGATAACC TCCTGCTACA GGTACCGCAA CCCCTCTCTG TAGGGTTTGA ACAACGTTGG
GAGAATGTAG GTAAGGTCAT CAATAATGGG ATAGAACTGG GTATCAATAC GGTCAATATC
AAGACGGAAG ATTTTGAGTG GACCACTGAT TTCAACATCA ACTATAACAC CAACAAACTG
AAGGAATTAC CCAGTGATAT TACCCGCACA CAGCCTACCT GGAGTATTTC CCAGATCTAT
CGCAATGACG GTAACCTGTA TGAATTCTAT ATGCCGAAAT GGTTAGGCGT AAATAAGGAA
ACAGGCGCCC CACAGTGGGA GGTGATCAAC AGGGATGCAA ATGGCAAGGA GATCTCCCGG
TCAGCCACTT CAGACTATGC CAGCGCTACC TACCAGGAGG TAGGTTCCGC TTTGCCTAAG
TTACAGGGAG GCTTCACAAC ACAGTGGACC TACAAGAACG TATCATTAAG CGTCAATGCC
TATTACCTGA CGGGCAACAA AGTATTCAGC AACAGTCTGC GTTTCGTGAT GAATGATGGC
AATGAGCCTT ACTACAACCA GATCAACCTG CCTTCGGATT ACAAGATATG GACGCATCCC
GGTGATGATG CAACAGAACC TAGTCCGCAA AATGCTGCCA ATTCCACAGA AACCTCCACC
CGCTATCTGA AAGACGGCGA CTTCCTGGCC ATCAGGAATA TCTCCTTGTC CTACAAACTG
TCAAAAGCCT GGATGACCCG CTGGCATATG GATGGAGTAA CACTGTCGCT GACCGCGGAT
AACGTATACA CATTCACTAA GTTCCTCGGA CAGGACCCTG CTACGACTAT TACCTCCGGC
AGTTATGTAA TGCCTGGCGT ATCGGATTTT AAGTATCCAA ATAACCGCCA GTTTCTGTTC
AACATCAACA TCAGGTTCTA G
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| Protein sequence | MKLTTFLLLV IILQVSAAGY SQKVTLTARN MPLRDVFTEI ITQTGVSIVY SESVLANTAP
VTFRVKDASV REVLDLCLHN QQVIYALEGK NFVIKKTIPP PAGTSPQADT TITIRGTVSA
AAGGPLPGAT VLVKGTRKGT QTNGEGQFTL SGVRKQDILI ISNIGFTTRE VAATEQVTLQ
LEEDTRNFNE VIVVGYSDKK KSELTSAVSV VSAEKLKDVT TNDVGSMLQG KVAGLQVVNS
SGVPGTAAEL RLRGVSSVNA SQTPLFVVDG IIGGNYDPND VESITVLKDA GATAMYGSQA
NAGVIIITTK KAKLGKTRFE AKVTTGFRKP DFGKMEMMNG SELYERHKEF YRDYIPGTDN
NSYKVDILKF YAERPKTLQQ QNYNWLTTMF GTAPVENVYI SASGTSEKSE YYTGLSYYNE
RGTFMNTGFQ RINLRGNSTY HFSKNVSVTN NINISGSTGN SYNYEDVYYA YLNMPWDNPY
DANRNPVYVD GNVGFKWWSR DKVNPIHTIK NSNHPYKNFD VNYDLGLNIN ITDWLSFSSS
NRAAVSYNKG SDYYSPVVAG LYNSTGYLNE LSTLSYGVIS NDLLKFNFHK GDHTISGLAG
IAIENSKTEI LGASGKGLPE GLSVLNVVSN NQLVTGSYDQ AIIQSFISQL SYGYKDKYFL
TGSYRVDGST AFPASKRYGS FPAVSAAWQI SHEDFLLHSR LFSNLKVRAS YGVTGTQDIG
SSRYLGLYAL SSQYNGGTAA TPSQLPSPNL TWESKRQLNA GLDIGLFNRI NLTIDAYNNV
TDNLLLQVPQ PLSVGFEQRW ENVGKVINNG IELGINTVNI KTEDFEWTTD FNINYNTNKL
KELPSDITRT QPTWSISQIY RNDGNLYEFY MPKWLGVNKE TGAPQWEVIN RDANGKEISR
SATSDYASAT YQEVGSALPK LQGGFTTQWT YKNVSLSVNA YYLTGNKVFS NSLRFVMNDG
NEPYYNQINL PSDYKIWTHP GDDATEPSPQ NAANSTETST RYLKDGDFLA IRNISLSYKL
SKAWMTRWHM DGVTLSLTAD NVYTFTKFLG QDPATTITSG SYVMPGVSDF KYPNNRQFLF
NINIRF
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