| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4152 |
|---|
| Symbol | |
|---|
| ID | 8360325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5179904 |
|---|
| End bp | 5181433 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644966323 |
|---|
| Product | Aldehyde dehydrogenase (NAD(+)) |
|---|
| Protein accession | YP_003123812 |
|---|
| Protein GI | 256423159 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.294946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTG CATCATCTGC TGCCCCTTCA ACCCTGGCGG CACGTCCTGA ATTCAAACCC
AGATATGATC ACTTTATAAA CGGTGAATGG GCGCCACCAT CCAGCGGTGA ATATTTCGAT
AACATTTCCC CGATTGATGG TAAAGTATTT ACACAGGCTG CGAGGGGGAA TGCTGCGGAT
ATTGACAAAG CCATCGATGC AGCACATGCT GCTTTTACAT CATGGGGTAA AACAGCTGCT
TCCTACCGCA GTAATTTACT GCTCAAGATC GCACAGATCG TGGAAGACAA CCTGGATTAC
CTGGCAGTTG TGGAGACAAT AGATAACGGT AAACCGATCA GGGAAACCAA AGCGGCGGAT
CTGCCGCTGG TAGTTGACCA CTTCCGCTAT TTTGCAGGTG TAATCCGCAG CGAAGAAGGC
ACCATCAGCG AACACGATGA AACTACTGTA AGCATTAATC TGCACGAGCC GATCGGTGTT
GTCGGACAAA TCATCCCCTG GAACTTTCCC CTCCTGATGG CTACCTGGAA AATAGCGCCC
GCACTGGCTG CCGGTTGTTG CGTGGTAGTA AAACCTGCTG AACAGACGCC GACCAGTATT
ATGGTACTGA TGGAACTGAT TGGTCAGGTA CTGCCAAAAG GCGTATTGAA TATCGTCACC
GGTTTTGGAG TGGAAGCAGG TAAACCGCTG GCTTCTTCGC CAAAAGTGCA GAAAGTGGCA
TTTACAGGCG AAACTACCAC CGGTAGACTG ATCATGCAGT ACGCATCAGA AAACCTGATC
CCGGTAACTA TGGAACTGGG TGGCAAAAGT CCGAACATTT TCTTCGAAAG CGTAGCTGAC
GCAGACGACG ACTTTTTTGA TAAAGCAGTG GAAGGCGCCG TATTATTTGC CCTCAACCAG
GGTGAGGTAT GTACCTGTCC CAGCCGTATA CTTGTACATG AACATATCTA CGACCGTTTC
ATGGACCGCG TGATCCAGCG TACAAAAGCC ATTAAAATGG GTAATCCGCT GGATGCAAAC
GTGATGATGG GTGCACAGGC TTCCGAAGAC CAGTACCAGA AGATCCTCAG TTACCTGGAT
ATCGGTAAAC AGGAAGGTGC AGAAGTGCTC ACAGGTGGTG AAGCTTTCCG TCAGAACAGC
GGTCTTGAAA ATGGCTATTA TGTGCAGCCG ACCCTGCTAA AGGGAAACAA CAAAATGAGG
GTATTCCAGG AAGAAATATT CGGTCCGGTA GCCTGCGTGA CGACGTTTAA AACAACAGAA
GAAGCCATCG CCATCGCCAA CGACACCCTG TATGGCTTAG GCGCTGGTGT ATGGACCAGG
GATGCGCATG AACTATACCA GGTACCCCGC GCGATCAATG CCGGTAGAGT ATGGGTAAAC
TGCTATCATG CTTACCCTGC ACATGCGCCT TTCGGTGGAT ATAAGAAATC AGGTTTTGGC
AGAGAAACGC ATAAGATGAT GCTGAATCAC TATCGTCAGA CCAAAAACAT GCTGATTTCT
TATGGTAAAC AGAAATTAGG TTTCTTTTAA
|
|---|
| Protein sequence | MSIASSAAPS TLAARPEFKP RYDHFINGEW APPSSGEYFD NISPIDGKVF TQAARGNAAD
IDKAIDAAHA AFTSWGKTAA SYRSNLLLKI AQIVEDNLDY LAVVETIDNG KPIRETKAAD
LPLVVDHFRY FAGVIRSEEG TISEHDETTV SINLHEPIGV VGQIIPWNFP LLMATWKIAP
ALAAGCCVVV KPAEQTPTSI MVLMELIGQV LPKGVLNIVT GFGVEAGKPL ASSPKVQKVA
FTGETTTGRL IMQYASENLI PVTMELGGKS PNIFFESVAD ADDDFFDKAV EGAVLFALNQ
GEVCTCPSRI LVHEHIYDRF MDRVIQRTKA IKMGNPLDAN VMMGAQASED QYQKILSYLD
IGKQEGAEVL TGGEAFRQNS GLENGYYVQP TLLKGNNKMR VFQEEIFGPV ACVTTFKTTE
EAIAIANDTL YGLGAGVWTR DAHELYQVPR AINAGRVWVN CYHAYPAHAP FGGYKKSGFG
RETHKMMLNH YRQTKNMLIS YGKQKLGFF
|
|---|
| |