| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4142 |
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| Symbol | |
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| ID | 8360315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5161151 |
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| End bp | 5165380 |
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| Gene Length | 4230 bp |
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| Protein Length | 1409 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966313 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123802 |
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| Protein GI | 256423149 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.369154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.17727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTGA CGTCAATATT GGCGGTAATA GCCAGCCCAT ATTTATTGGC GCAGAACAAG
CCGGCTGCTA CTCGTGTGCC GGTTGCAAAG CCTGTACCCT TGCCTCCGGC TTATTCATTG
ACGACGATAA ACAGCATACG TAGCTGGACG CCTTCCCGTC CATTTACTGA TCCGGCTCAG
GTAATTTCGC CGTCCAGGAC AGTGGCAGAA GTCAGCTTGG AAACCCGGTA TTTCGATGGG
TTGGGGCGCC TGTTACAGAC GGTCGACAAG CAGGCCAGTT CCATGGGGAA AGACCTGATT
ATGCCCTATG TGTATGATGC CTTTGGCAGA GAGCAGTTTG ATTATCTGCC TTATACGCAG
AAAGCAGGGG CGCAAAACGG GCAGTTTAAA CAAACACCAT TCAGCGAGCA ACAAGCGTTT
TACAGAGATA TCGGTTTGTC TCCCGGAACA GGCGCTGACA GCATTTATTA TTCACAGACC
TTATACGAAC CATCACCGTT AAACAGGGAA ATACAGACAT GGTCGCCCGG GAATACCTGG
GCAAAAGAAG GCGGTAACCA CCCTGTAAAA CAACAGTATC TTATTAATAC GATAAATGAC
TCTGTGCGGT GCTGGCGGCT GTCTCCCGGA ACGACAATGC CAGTGAGCAA TAGCATATAC
AATGGCGGAT GTCTCTATAA AGAAGTGACG GTCAATGAAG CCGGCGTGCA GACAATCACT
TACCGGGATC TGGAAGAACT TATCATCCTG ACAAAAACAC AGCTGTCCGC CAACCCGGGA
AGCTCACACA TGGGATGGCT TTGCACCTAT TACATATACG ACAACATTGG CAATCTGCGC
TTTGTAATCC CGCCCAAAGC TACAGATATT CTCCGGGGAA ACTGGACACT CTCCACTACA
ATAGCAAGTG AATTGTGTTT TATATACCGG TATGACAATC GATCACGTAT GATCGTCAGG
AAGATGCCTG GCGCGGACAG TGTTGAGATG GTCTATGATA AACGCGACAG ACTGGTGGCC
AGCAGAGATG GTATTATGCG CATCATGGGG CAATGGCATG TCTGCTGGTA TGATCAGTTG
AACAGGGAAC TGAAAACCGG ATTGGTCAAT CTTGGGGATA ACAGAACTAC ATTACAGCGA
CGTATTGATC TGATATCCCC CGGAAAGCAG GATACCTTTG CTTTTGTCAA CGCTGGGCAA
ATCCGGCTGC TGACGTATAC GTATTACGAT ACATATAATT TCCCGGACAG ACAGGCATAT
ACAATTGCCG ATCTCTCTAA GTTACCCGCC GGAGCCAACC TATATGCAGA AGTCCTGCCT
GATTTAGCCA GTAGTAAAAC AAAGGGGCTG GCGACAGGGA AGCGCGTCCG TGTAGAAGCG
ACGGACCAGT TTATTACCTC TTCCGTTTAC TATGATCATA AAGGGCGTAT TATTCAGACG
ATTGCCAATA ATATGGCTGG TGGAAAGGAC GTTGCCAGTA GCCGCTACGA CTTCCGTGGG
AAAATACTCA GTACCTATCT GCGACATACG AATCCACGCA GCGTATTGAC GCCGCAGACG
ACCGTACTCA CTATGTTTGA TTATGATGCC AGGGGCAGAC TGGATTCCAT CAAAAAACGG
ATCAATGATG ACCTGGCGAA TGAGCGAACA ATTGCTGTTA ATACGTATGA TGAATTGGGG
CGACTGCGTA CAAAAAGGCT CGATGTGACA GGAGTGAATA CGCAATTGGA AACATTGCAA
TATGAATATA ATATAAGAGG GTGGTTGAAG TCCATTAACG GACAATTTGT AAATACTCCC
AATTCCACTA CTAACTGGTT CGGACAAGAA TATTGTTACG ATGATGGTTT TGACAGCATC
TCATATACCG GTAATATCGC CGGCATTAAA TGGAAAAGCG GCGCTGATGG TATCGCCCGC
GCGTATGGTA TGGGGTATGA CAAAATAGAC CGTTTAACAT ATGCAAGCTT CACACAACAA
ATCAGCAGTA GCTTATGGAC AAACGAAAAA GTCGATTTTT CCGTTAGCGG ACTAACATAC
GACGTAGCAG GAAATATATT ATCGATGAAT CAAAAGGGCT TGAACGGATT GACTATCAGG
ACCATTGACA GTCTGAAATA TGATTATTTT GCAAATAGCA ACCGCTTGAG CTTCGTCACC
GACAAGGCCA ATGATCCAAC CAGTATTTTA GGCGACTTCC ATGAACAGGA CAACCGGGAA
GTACAGGATT ACTGGTATGA TTCTAACGGA AATGTGGCCA AAGACAGGAA CAAATCCGTC
GACACCGTAT TGTATAACTA CCAGCAGTTA CCAGCCATTC TCCTGGCGAA AAACAGGAAG
GCAGCCATCT ATAACCTCTA TGCTGCAGGT CAGCGTGATC TGCTGGCAAA AATGGTATCC
GATACAAGCG TAGTACCACA CCAGTTCCGT GTAACGAATT ATATCAATGG TTTTCAATAT
GAACAAGACA CGCTGCGATT CATCACCCAG GAAGAAGGAC GTATAAGACC CATCTATCAA
TCAGGTAAGC CGGTTCGGTA TACAATAGAC TATTTCATCA GGGATAATCT GGGTAACGTT
CGGATGGTGC TTGGCACCAG GCGTGACACG ACAATCTACC GGGCCACTAT GGAAACGGCA
GTCGCCGCAA AAGAAAATGC GATTTTCAGT AATATAGAAC AGACACGTAG TAGTAAACCT
GTTGGCTATC CTGAAGATAA AACGACAGCG GCGAATGCTT ATGTCGCCAG ACTGAATGCG
GTAAACGGGC AAAAGATAGG TCCGGCTTTA GTACTGCGCG TAATGGCAGG AGACAGTATT
CAGATAGGTG TGAGGGCCTT TCTGAAAGAT CAGGGCGCTT CAAGAAACAG CGTAAATGCA
GACGGGATGG CGGCCGCTTT GTTACATGCG TTGAGTGGCA ACGCGGAAAA TAACACAAAG
TATAATCTGC AGGAGGATAT CCCGTTCTCC GCAGGTATCA GTAGCGATAT CTACACACAG
CTAAAAGAAA AAGATCCTGC AGAAAATCTA CCAGATAATC CAAAGGTTTA TCTATGCTTT
GCCGCATTTG ATGAACAGTT CAGTCTTGTC GGTCAGAATG CAGGCGCGAA ACAGGTACAA
CGTACAACAG ATGTCTTACA AACGCTGGTA TCGCCTTCAA TGCGGATACA AAAGAGCGGA
TATATTTATA TTTATACCAG CAATGAAAGT GCACGGGATG TATACTTTGA TAATCTGACA
GTTACACGAA TCAGTAGTTC GTTGTTAGAA GAAACGCATT ACTATCCGTT CGGGCTTATC
ATGGCTGGTA TCAGTTCTTC TGCGATAAAA GAAAATGCAT ATCCAGTAAA TAAAAAACTA
TACAATGGTA TCGAGTTTAA TACGGATCTT GACCTGAACG AATATGACGC ATTCTACCGA
ACATTAGACC CACAGACCGG CAGATGGAAA CAGATTGACC CAAAGATTGA AAACATGGAG
GCATGGTCAC CTTATGCTTC GAATTTCAAT AACCCGATGC GTTACAGCGA TCTGCTGGGA
GATGAACCCA TACCTATAAA AGGAGTCTTT AAGACATTAG GGGCTTTAGC CAATATAATG
GCGAACACGC TATTCAGAGT GACTGCCGAG AACCGGAAGG AGAATATGGC GGTCGTCCGG
AATGCGGTTA ATAAAGGAGT AGAGAATTTT AAAGGTCGAA TAGCTACCGG AACGACTACT
CCACAACTGA TTTATAAAGA ACTGAGAGAG AATCCCCTGG CAGCAATTAC TGGCCTGGGA
GGTTTAGAAC TGAAAGGTGC GGCATTTGCA GTAGAGGAAT TTGTGGCGAC GTCGAAGGCA
GGTGGAACAG GAGGGAAGGT GGCAGTAGAA GGGGAAATGG GGGTGAAGAT GTCGGGGAAG
TTGGATGGCG CGGGTAGGGC GGCAGAATAT GGAGGAGGTT GGGAGAGTGC AAGTTTGAAA
GAGGCTATTG AGAAGTTTGC GCCAGGGGCT GAAGGTGTGG CGAGTGAAAC AGGAGGGAAA
ACACTTTTTG TTAACAAAGA AACTGGAGTA CAGATAGTAT ATGATAAAGG GGGAAATTAT
TTTCGAATAC AGGACACGAA GATAAAAGGG CAAAGAGTCT ATCTCGATTG GAATGGGACA
CTACCAAATA ATAAAATAGT TAATGGAAAG CAGATGGGAA GATCAAAGGG AGAATATAAT
CAAGCTACAC ATTTTAGAAA CGTTGACTAA
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| Protein sequence | MILTSILAVI ASPYLLAQNK PAATRVPVAK PVPLPPAYSL TTINSIRSWT PSRPFTDPAQ
VISPSRTVAE VSLETRYFDG LGRLLQTVDK QASSMGKDLI MPYVYDAFGR EQFDYLPYTQ
KAGAQNGQFK QTPFSEQQAF YRDIGLSPGT GADSIYYSQT LYEPSPLNRE IQTWSPGNTW
AKEGGNHPVK QQYLINTIND SVRCWRLSPG TTMPVSNSIY NGGCLYKEVT VNEAGVQTIT
YRDLEELIIL TKTQLSANPG SSHMGWLCTY YIYDNIGNLR FVIPPKATDI LRGNWTLSTT
IASELCFIYR YDNRSRMIVR KMPGADSVEM VYDKRDRLVA SRDGIMRIMG QWHVCWYDQL
NRELKTGLVN LGDNRTTLQR RIDLISPGKQ DTFAFVNAGQ IRLLTYTYYD TYNFPDRQAY
TIADLSKLPA GANLYAEVLP DLASSKTKGL ATGKRVRVEA TDQFITSSVY YDHKGRIIQT
IANNMAGGKD VASSRYDFRG KILSTYLRHT NPRSVLTPQT TVLTMFDYDA RGRLDSIKKR
INDDLANERT IAVNTYDELG RLRTKRLDVT GVNTQLETLQ YEYNIRGWLK SINGQFVNTP
NSTTNWFGQE YCYDDGFDSI SYTGNIAGIK WKSGADGIAR AYGMGYDKID RLTYASFTQQ
ISSSLWTNEK VDFSVSGLTY DVAGNILSMN QKGLNGLTIR TIDSLKYDYF ANSNRLSFVT
DKANDPTSIL GDFHEQDNRE VQDYWYDSNG NVAKDRNKSV DTVLYNYQQL PAILLAKNRK
AAIYNLYAAG QRDLLAKMVS DTSVVPHQFR VTNYINGFQY EQDTLRFITQ EEGRIRPIYQ
SGKPVRYTID YFIRDNLGNV RMVLGTRRDT TIYRATMETA VAAKENAIFS NIEQTRSSKP
VGYPEDKTTA ANAYVARLNA VNGQKIGPAL VLRVMAGDSI QIGVRAFLKD QGASRNSVNA
DGMAAALLHA LSGNAENNTK YNLQEDIPFS AGISSDIYTQ LKEKDPAENL PDNPKVYLCF
AAFDEQFSLV GQNAGAKQVQ RTTDVLQTLV SPSMRIQKSG YIYIYTSNES ARDVYFDNLT
VTRISSSLLE ETHYYPFGLI MAGISSSAIK ENAYPVNKKL YNGIEFNTDL DLNEYDAFYR
TLDPQTGRWK QIDPKIENME AWSPYASNFN NPMRYSDLLG DEPIPIKGVF KTLGALANIM
ANTLFRVTAE NRKENMAVVR NAVNKGVENF KGRIATGTTT PQLIYKELRE NPLAAITGLG
GLELKGAAFA VEEFVATSKA GGTGGKVAVE GEMGVKMSGK LDGAGRAAEY GGGWESASLK
EAIEKFAPGA EGVASETGGK TLFVNKETGV QIVYDKGGNY FRIQDTKIKG QRVYLDWNGT
LPNNKIVNGK QMGRSKGEYN QATHFRNVD
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