| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4140 |
|---|
| Symbol | |
|---|
| ID | 8360313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5159869 |
|---|
| End bp | 5160342 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644966311 |
|---|
| Product | (2Fe-2S)-binding domain protein |
|---|
| Protein accession | YP_003123800 |
|---|
| Protein GI | 256423147 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.478107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.124056 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGC TTAAAATCAA CCAGAAAGAG TATTCAGTGG ACGCCAGCCC TGACATGCCA
TTATTATGGG CATTAAGGGA TGTACTGGGA TTGACTGGTA CCAAGTTCGG TTGCGGAATG
GCGCAATGTG GCGCCTGTAC CGTGCATTTG GATGGAGAAG CAGTACGTTC ATGTGTGACA
CTGGTGTCAA GAGCCGTCGG GAAAGAAGTC ACTACGATTG AAGGACTATC CGCAGATCCG
ACCAATTACC TGCAGAAAGC ATGGCTGGAA ATCGATGTAC CGCAATGCGG CTATTGCCAG
TCCGGACAAA TTATGTCTGC AGCAGTATTA TTGAGAGAAA ATCCGAATCC AACAGATGAA
GACATTGACA ACGCAATGTC CGGGAATATT TGCCGCTGCG GCACCTATCC CCGTATAAGA
AGGGCTATTC ACTTAGCCGC ACAAATGCAG CGGGAAGGAG GTAATGGAAA ATGA
|
|---|
| Protein sequence | MVKLKINQKE YSVDASPDMP LLWALRDVLG LTGTKFGCGM AQCGACTVHL DGEAVRSCVT
LVSRAVGKEV TTIEGLSADP TNYLQKAWLE IDVPQCGYCQ SGQIMSAAVL LRENPNPTDE
DIDNAMSGNI CRCGTYPRIR RAIHLAAQMQ REGGNGK
|
|---|
| |