Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4136 |
Symbol | |
ID | 8360309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5155257 |
End bp | 5155856 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966307 |
Product | hypothetical protein |
Protein accession | YP_003123796 |
Protein GI | 256423143 |
COG category | [R] General function prediction only |
COG ID | [COG2068] Uncharacterized MobA-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00743019 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAAAAT ACGGTGTAAT CATTCTGGGA GCGGGTAATT CTTCCCGCCT GGGACAACCG AAACAATTGC TGATGTACAA GGGCAAAACC CTGATCTGTC AGATGGCTGA AGAGGCGATA GCAGCAGTAG GAAGCCCCGT TGTACTCGTA ACAGGTGCAA ATGCACCCCA GATATTGGAG AAATTGTGCG GATTCGCCAT CGAAATAGTA GAGAATGAAC AATGGTCGGA AGGTATGGGC TCTTCCATCA GCACCGGAAT GAAAGCCATC GCCAAACATT CCGGCCTCAC AGGTGTCATC ATTATGGTAT GTGATCAGCC TTTCGTAAAT GCAGCCTTGC TGCAACAACT GATCGATCAG CAGACGATCG CCGGAAAAGG CATCATCGCC AGCACATACG ATAATACAGC CGGTACTCCC GTTCTTTTCA GCAATACTTA TTTTGACGCA CTTACCGCTC TCGAAGGACA GCAGGGCGCT AAAAAGATAT TACAGCAGTC TACCGATGAC CTGGCACTTG TGCCATTTCC CTTAGGCGCG CTGGATATAG ATACCGCTGA AGATTATCAG CGATTACTAA CAGGGCAAGT TGCAAACTGA
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Protein sequence | MEKYGVIILG AGNSSRLGQP KQLLMYKGKT LICQMAEEAI AAVGSPVVLV TGANAPQILE KLCGFAIEIV ENEQWSEGMG SSISTGMKAI AKHSGLTGVI IMVCDQPFVN AALLQQLIDQ QTIAGKGIIA STYDNTAGTP VLFSNTYFDA LTALEGQQGA KKILQQSTDD LALVPFPLGA LDIDTAEDYQ RLLTGQVAN
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