Gene Cpin_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4136 
Symbol 
ID8360309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5155257 
End bp5155856 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content48% 
IMG OID644966307 
Producthypothetical protein 
Protein accessionYP_003123796 
Protein GI256423143 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00743019 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAAAAT ACGGTGTAAT CATTCTGGGA GCGGGTAATT CTTCCCGCCT GGGACAACCG 
AAACAATTGC TGATGTACAA GGGCAAAACC CTGATCTGTC AGATGGCTGA AGAGGCGATA
GCAGCAGTAG GAAGCCCCGT TGTACTCGTA ACAGGTGCAA ATGCACCCCA GATATTGGAG
AAATTGTGCG GATTCGCCAT CGAAATAGTA GAGAATGAAC AATGGTCGGA AGGTATGGGC
TCTTCCATCA GCACCGGAAT GAAAGCCATC GCCAAACATT CCGGCCTCAC AGGTGTCATC
ATTATGGTAT GTGATCAGCC TTTCGTAAAT GCAGCCTTGC TGCAACAACT GATCGATCAG
CAGACGATCG CCGGAAAAGG CATCATCGCC AGCACATACG ATAATACAGC CGGTACTCCC
GTTCTTTTCA GCAATACTTA TTTTGACGCA CTTACCGCTC TCGAAGGACA GCAGGGCGCT
AAAAAGATAT TACAGCAGTC TACCGATGAC CTGGCACTTG TGCCATTTCC CTTAGGCGCG
CTGGATATAG ATACCGCTGA AGATTATCAG CGATTACTAA CAGGGCAAGT TGCAAACTGA
 
Protein sequence
MEKYGVIILG AGNSSRLGQP KQLLMYKGKT LICQMAEEAI AAVGSPVVLV TGANAPQILE 
KLCGFAIEIV ENEQWSEGMG SSISTGMKAI AKHSGLTGVI IMVCDQPFVN AALLQQLIDQ
QTIAGKGIIA STYDNTAGTP VLFSNTYFDA LTALEGQQGA KKILQQSTDD LALVPFPLGA
LDIDTAEDYQ RLLTGQVAN