| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4129 |
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| Symbol | |
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| ID | 8360302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5144364 |
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| End bp | 5149391 |
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| Gene Length | 5028 bp |
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| Protein Length | 1675 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966300 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123789 |
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| Protein GI | 256423136 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.3835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.157034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC GCCAATTCTT CCCCACGAAG ATTATCCCTG ACTTTGAAAC AAACCTTGTT
TCGACCCTGA AATCCGTGTA CGACGGAACT GCCAGCCACG AACTACTGAC AAAAAGAACT
GCAGAAATTA CCCTTCAGCT GATGGGTAAA CTACAGGAAA AAGAGCAGGT CAGCTTTGTG
TCTTATGCAA TGACAGCTGC TCGCCAGGAG AGAATAACGG AACTGTTGCC CACCGAAAAT
GAATGGGATA ACGAAGAACT GTACAACCTT TTGCGTTTTC TCTTTGGCGA TGAAAAAGCC
GTGTACGTAA AACATGCCTG GAGCAAGTTT CCCAACCTCA TGTACATGAG CGGTTGGAAT
CGCCGCTCTT TCCGTGCTCC TGAAAGAAGA GAAAAATACC TGCCTAATCA GCTCACTTTT
CTGAAAGGGA TTATGCTGCA GGTACACGTC TACGGCATCG ACACGCATTA CCAGTACGAG
TGCTATGATC TCACTATCAA AGAACAGATT ATTGTGGACC ATGAGCATGA TACACAATAT
CTTTATCATA TGTGGGCGGC AGCCATCGAT CTGGGTAATG AAGAGATATT TAAGCTATTT
GAAGATATTA TTTACAATAA AGAGCCGGAA GGTAAAGTCA GCGACGGTAT CATCAGAGCG
CTCCTGTTAA GCGAACGCGA AGATGCCTGG CAACTGGTAG AGAAACTACT GTTGTCAGCA
CAAAGACAAG AGGGATTACG GCAGACCATA CTCGAAGCAC TGGACGATTG CAGTACCGGC
GCTTTGAAGT ATATGCTCAA AGTGGTTATA GATAACAAAC TGACCAGATT TTCCTCCGTC
GTAAGAGCAC TGGATGTATG GGCCGGTATC AACTGGGAGT CTGAAAAAGA ATCCGCTGTT
ATTCGCTTCC TTCAAAAAGC ACATACGTAT CTGTCAGATC CCTCACTGAT CCCCGCGGCA
ATTAACGGTG ACGACTTTTC TGATATATAC ATGGGGCTCT GGGCGCAAGG TGTATATAAT
GTAGAGCAGA CATTGCCCTA TCTAACAACA TTAGCCCACA GCTCCTCCAG GCAGAAGCGG
AGTATTGCCC AGCAGTTTGT AGATGATACC AGCCACTACC AGCTGATGCT CTCTGTAGGA
CGCATTGGTA TAGAAGATGA AAGTTTAGCA GTCGTTGCCC TGGCAACCGC TGTGCTGCGT
GAGCCGATTG CCGATGATCC TAAACGTTAT AATGAACAGT ATCCCGACCT GTTTGATAAA
CTACATGCTG TCATTTTACG CTCCGACGTC AAAGAGAAAA CCTTTGATAA ATTACCCTTC
AGCTGGATGA ATAATCAATA TAAGCGTAGT GATGTATTAC AGGCAATGCT CCCGCTGATA
TTCGATCAGC AGGACAGACT GGATCTGATG ATGTCCTATT TTGACGACAT GGATCTTGAT
GTGAAATCAA CCATGACAAG ACGGATCCTG AAAGGATATG CAAAATCATA CTATGAGGAT
CCCGAAAAAC TGGAACCTGT CACCAGTTTC CAGCGTGGCT TCAGTATGCG TATCATCAGG
GAAAGAGGCG AATCTTTACA GAATGCCGGT TTCAAAGCCC TGGCCACAGT GGAACTGGAC
AAAGAAGAAC TGAAAGTATT CAAAGACCTC CTGAAACGCA AAAGTGGCGG CATACGTAAT
CAGATCATCG GTATCCTGCT GAAACAGCCG GATACACTGC TGATCAGCGT ACTGAAAGAG
CTGCTGGAAG GAGATGGAGA GCAACGTCTC GCCGGACTCG ATATCGCCCT GCAATTACAG
CAGCAACAAC GTTTACTGGA TGCCCTGCAG CCATTACTGG AGGCATTCAG AAGCAGAAAG
AGCATTCCGG AAAAGGAGGC TATTATACTC GGCCAGCTAT CCGCTGAAGG GACCGGGGCT
GTTGTTTATG ACAGCAGTAA TGGTTACGGA TTATATGATC CGGCAGCTAT ACCCCCCATT
GTAAAACCTG TTCCTGATCC GACTGATTTC TATCACCAAT GCTTAGCCCA GGGAAACTTT
GGCTTGTCGC AGCCGGTAGA AAAGGTTAAA CAGGCGTTGC TGGACCTCTA CAAGCTATTC
ATCGCGAACA AAGACTTCGA ATACCAGGTA GAAGGTTATA ATAACAATGT AGAAACGGTA
TTACTGGGAC AGCTTTTCTC CAGGATGTCA AGAATCGCTG AAACGACGCT TTCGCCTGAA
GAGGAATATG CTACGTATCC GTTACCGGAA CTATGGAAAG GCTGGTATGA ACAATCCGGA
CTAACACCAG GAGATCTGTA TATTCTGAGT GAACTGACTG TCCAATCTGA GTATGACGGC
TTTACGGAGG ACAATCAGGT GGCGAAACCA TTTATAGCAG AGCTGATGGC CTATATGCCT
GAAAATCTGC CAAGCGAATA CGCCTACCGA TGGTCAAACC CATTATTGCA GATCATGCAG
GCATTGCAGA TCATCCATCC TTTCGCAGAA ACAGAACCAT TCCTGGTAGG TGCTGCAGCC
ACAGCCTTTG CAGCTTTACC GGAAGAAGTA TTGAAAGCAA CATTCGACAC ATACAGTTAC
TATAACGGAG GAGATGGCTG GCAGCAGGAC TCCATCCTGA ACTGGTATAT CAATAAGATC
ACGATCAGCC GGCTGCCGGA AGAACTGCTT ACACGCTGCT GGGATCTATA TCATTGGCGT
CAGTTCAGCG GTCTGCCCCA AAACAGCAAA TATTATTTAC CCCCACTGGA CCTCTTTGGC
AGAGCATTTC AGAGCGGATT GATCTCCGAA AGTGAAATGT ACCGCGGTAT CCTCTCCGGT
GATAATATCA GGGAACTCTC CGACAGAAAA AGGGCGAAAC ATGAAAAGAG CTATTTCGAT
AGGTATCCTT TCTTACAGGC TATGTTCCTA CGCGTACGGG AACATTTGCT CGATATAGAA
CTGAAACGGG GTGATACCGC TACTACCGTG ACGGATTTTG TGAAGGAACT GGAATCACTG
GAAGGTATCA ATCGTTTTGC AGACATCCTG GCTGGTATGG GTAAAACCAC GCTGCACAAA
GGCTATATCT ACTCTTCTGA AAGCGAAAAC AAACAGCAGT TATTCAGTAC CCTGCTAAAG
AGATGTTTCC CGCTGGATAC CGATACAGAC GAGATGTTCG CAGCTGCTAT GAAGCGTATC
AAGGTCACCG AAACCCGTTT GCTGGAAGCG GCCGTATATG CACCGCAATG GCAGAAATTT
GTGAGCAAAT ACCTTAGCTG GAAAGGGCTG GATACCGCTA TCTGGTGGAT GCATGCGCAT
ACGAAGACTT CGACCTATGC AGAAAAAACG CCTGAGGCAG AAAGCGAGAT CGCACGCTAC
TCTACCATAG ATGTACAGGA CTTCAAAGAC GGTGCGGTTG ACAAAGAATG GTTTGAACAG
GCTTACCAGG AAATAGGGCA GGAGCGCTGG CAGAAGGTCT ATGACGCTGC TAAATACATC
AGCGATGGCA ATGGTCACCG CAGAGCGAGA TTATATGCAG ATGTAATGAC TGGCGACCTG
AAGATCAAAG AAGTTACAGA GAAAGTAAAA GATAAACGTG ACCAGGATTA CCTGCGTGTT
TATGGGCTGA TACCATTGAA CAAATCCAAC GCAGAAAAGG ATATCCTGGC CCGCTACGAA
TATATCCAGC AGTTTAAAAA AGAAAGTAAA CAGTTTGGCG CCCAGAAACA AACCAGTGAA
GGGACTGCCA TCCGCATCGC CATGGAAAAC CTGGCCAGAA ATGCAGGTTA CGCAGATCCG
CAACGACTGA CCTGGGCCAT GGAAACCAAA CAGGTACAGC AGATCCTGTC CAGGGAGACG
CAGGTACAAT ACGACGACGT ATTGATTGGC CTGATTATCG GTGATGATGG TGAAGCAGAT
GTGGTAGCGT TCAAAGAAGA TAAAAAACTG GCTGGTATAC CCGCCAAATA CAAAAAGGAT
ACGAAAGTAC TGGAGCTGTT AGAGTTCAAA AAGACCTTGA GAGAGCAATT CCGTCGTTCC
CGCAAAGCGC TGGAAGAAGC GATGGTAAGA GGTGATGCGT TTGAGGCGGA AGAACTTAGC
AACCTGTTTA CGCATCCGAT TATTGCCAGA CACCTGGATA AACTTGTGTT CGTCACGTCT
AAAGGACATG GTTTCTGGAA AGATGGCGCA TTAGCGCCTG CTAAAGGCAA AGCGACGAAA
ATCGCGGCTG GTGACAAAGT TCGTATTGCA CATTGCGTGG ACTTACACGC CAATGGCAGC
TGGAGTGATT ATCAGCAGTA TTGCTTTGAA AAACAGGTAC AACAGCCATT CAAACAGATC
TTCCGTGAAC TGTATGTTCC GATACACGAA GAATTGCAGG AAAAGTCCAT TTCCCGCCGT
TATGCCGGTC ACCAGGTACA ACCGTCCAAA ACAGTGGCAT TGCTGAAATC AAGGGGCTGG
AAAGTGGATT ATGAAGAAGG GTTACAGAAG GTATTCCACA AGCAGGGCTT TATGGTGAAG
ATGTATGCAC AGGCGAATTG GTTCTCTCCG GCAGAAGTGG AAAGTCCTGT ATTAGAAGAA
ATCATCTTCC ATAATATCAA GACCTGGGAG AATGTAGCTT TTGAAACGAT CGATCCACTG
ATCTTCAGTG AGGTAATGCG TGATATAGAC CTGGTAGTAA GCGTAGCTCA TGCTGGCGGT
GTAGATCCTG AGGCCAGCCA TTCCACCATC GAAATGCGCA CGGTATTGCT GCAGGAAAGC
GCCAGATTGT TTAAGCTGGA TAATGTCACT GTCAGCGGTA ACCACGCGAA AATAGCCGGA
GAATACGGAG AATACAGCGT ACATCTGGGC AGTGCCGTGG TACACCAGAT GCCGGGTAAA
TACCTGTCTA TCTTACCGGT GCATTCACAG CAGCGTGGCA GATTATTCCT GCCTTTCGCA
GATGATGATC CGAAATCGGC TGAACTGATC GCTAAAGTGC TGTTACTGGC AAGAGATAAA
GAAATCCAGG ATCCGACCAT CCTGCGTCAG CTGCGGTTTA CGAATTAG
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| Protein sequence | MDIRQFFPTK IIPDFETNLV STLKSVYDGT ASHELLTKRT AEITLQLMGK LQEKEQVSFV
SYAMTAARQE RITELLPTEN EWDNEELYNL LRFLFGDEKA VYVKHAWSKF PNLMYMSGWN
RRSFRAPERR EKYLPNQLTF LKGIMLQVHV YGIDTHYQYE CYDLTIKEQI IVDHEHDTQY
LYHMWAAAID LGNEEIFKLF EDIIYNKEPE GKVSDGIIRA LLLSEREDAW QLVEKLLLSA
QRQEGLRQTI LEALDDCSTG ALKYMLKVVI DNKLTRFSSV VRALDVWAGI NWESEKESAV
IRFLQKAHTY LSDPSLIPAA INGDDFSDIY MGLWAQGVYN VEQTLPYLTT LAHSSSRQKR
SIAQQFVDDT SHYQLMLSVG RIGIEDESLA VVALATAVLR EPIADDPKRY NEQYPDLFDK
LHAVILRSDV KEKTFDKLPF SWMNNQYKRS DVLQAMLPLI FDQQDRLDLM MSYFDDMDLD
VKSTMTRRIL KGYAKSYYED PEKLEPVTSF QRGFSMRIIR ERGESLQNAG FKALATVELD
KEELKVFKDL LKRKSGGIRN QIIGILLKQP DTLLISVLKE LLEGDGEQRL AGLDIALQLQ
QQQRLLDALQ PLLEAFRSRK SIPEKEAIIL GQLSAEGTGA VVYDSSNGYG LYDPAAIPPI
VKPVPDPTDF YHQCLAQGNF GLSQPVEKVK QALLDLYKLF IANKDFEYQV EGYNNNVETV
LLGQLFSRMS RIAETTLSPE EEYATYPLPE LWKGWYEQSG LTPGDLYILS ELTVQSEYDG
FTEDNQVAKP FIAELMAYMP ENLPSEYAYR WSNPLLQIMQ ALQIIHPFAE TEPFLVGAAA
TAFAALPEEV LKATFDTYSY YNGGDGWQQD SILNWYINKI TISRLPEELL TRCWDLYHWR
QFSGLPQNSK YYLPPLDLFG RAFQSGLISE SEMYRGILSG DNIRELSDRK RAKHEKSYFD
RYPFLQAMFL RVREHLLDIE LKRGDTATTV TDFVKELESL EGINRFADIL AGMGKTTLHK
GYIYSSESEN KQQLFSTLLK RCFPLDTDTD EMFAAAMKRI KVTETRLLEA AVYAPQWQKF
VSKYLSWKGL DTAIWWMHAH TKTSTYAEKT PEAESEIARY STIDVQDFKD GAVDKEWFEQ
AYQEIGQERW QKVYDAAKYI SDGNGHRRAR LYADVMTGDL KIKEVTEKVK DKRDQDYLRV
YGLIPLNKSN AEKDILARYE YIQQFKKESK QFGAQKQTSE GTAIRIAMEN LARNAGYADP
QRLTWAMETK QVQQILSRET QVQYDDVLIG LIIGDDGEAD VVAFKEDKKL AGIPAKYKKD
TKVLELLEFK KTLREQFRRS RKALEEAMVR GDAFEAEELS NLFTHPIIAR HLDKLVFVTS
KGHGFWKDGA LAPAKGKATK IAAGDKVRIA HCVDLHANGS WSDYQQYCFE KQVQQPFKQI
FRELYVPIHE ELQEKSISRR YAGHQVQPSK TVALLKSRGW KVDYEEGLQK VFHKQGFMVK
MYAQANWFSP AEVESPVLEE IIFHNIKTWE NVAFETIDPL IFSEVMRDID LVVSVAHAGG
VDPEASHSTI EMRTVLLQES ARLFKLDNVT VSGNHAKIAG EYGEYSVHLG SAVVHQMPGK
YLSILPVHSQ QRGRLFLPFA DDDPKSAELI AKVLLLARDK EIQDPTILRQ LRFTN
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