| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4127 |
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| Symbol | |
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| ID | 8360300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5141883 |
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| End bp | 5144114 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966298 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003123787 |
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| Protein GI | 256423134 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.313016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0728263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA GAAGTATTGT CAATAAGGAT AATACCAACT TATTGAACTG TGAAAGTGAA
CCGATCCACA TTCCGGGTTG TATCCAGGAG CATGGCTTTT TACTTGGGCT GGCAGCGGAT
TCCCTGCTTA TCAGGTATAG CAGCGAAAAT GTATTCACGT ACACAGGGTT TACACATCAG
CAGCTTTTAG GTAAACCCCT GCAACAGTTA TGTAGTGCAG AACAGGAAGA TCTGCTACGC
GAATTTCTGA CAGCAGCCTC ATTTGACCAG AGTCAACCAT TTGTCTTCAC CATCAACAAT
GTAAAATACA ACACCAAACC GCATATCAGT AACAGTACCG TTATCCTGGA ATTTGAACCT
TTTCCTGATG GAACGCTGGA CCTGCCTAAC CTTTATAAAC AAACACAACA GTTCGTTTCT
TATCTGAATG ATGCACAGGA CCTGCGGCAG TTATGTCAGT CTATTGCACA GGAAACCAGG
GCCATCACCG GTTATGACCG TGTAATGATC TATCGTTTTG ATAAGAACTA CAATGGAGAA
GTGATCGCAG AGGCGAAACA GGAAGAGCTA CTGCCATTAC TGGGTCATAA CTATCCGCAT
ACCGATATTC CTGCGCAGGC CCGGGCCTTG TACCTGACCA ATATGCTACG CATGATCGTG
GATGTAGATT ATACACCCGT TCCGCTGTAT ACCATTGCAG ATGAAAAGGA AGAGAAACAC
CTCGACCTCA GCTTATCCAT TCTCAGAAGT GTATCTCCCA TACATATCGA GTATCTGAAG
AATATGGGTG TCAAGGCGAC ACTTACGATC TCTCTCTTGC AGGATAATAA ACTCTGGGGA
CTGATCTCCT GTCATCATTA TTCGCAGAAA AACATTCCGC ATTATACACG TTTATCCGCG
TTGTTACAGG GATATTTTTT CACGTCCCAG ATCAAGGTCA GACAAGCAGC TGATGAATAT
AATTACGCAC AATATATCGA AGACAATATC CGGCCCTTGC TGGAGCTGAT GTCTACAGGA
GATGACTTTA TAGCACAACA TTATCATAAT ACATTGCTGA GGGACTGTAT ACGCGCATCC
GGCTTTGTTA TCGTGCAGAA TGATACGATT TTCAGAAACG GGAAAGTGCC CCCCGATAGA
CAATTGCTTC CTTTACTGGA ATGGCTGAAG GAACATGCCG GTAACGGACA ATTCTCCACC
GATCACCTGA TAGCGGTTTA CCCTCCTGCT GAAGCGATGA ATGATACAGC AGCCGGTTTG
ATCTATCATG CACTGGATTC AGGTGGTAAA AACTGTGCAC TCTGGCTACG TCCGGAGATG
GAGAAATCAA TCAACTGGGC GGGTAATCCA AGCAAGGGGA TTGTGATGGA CTCAGCAGGC
GCCAGACTCT CACCCCGTAA ATCATTTGAG CTGTGGAAGG AAGTGGTGAA ACATTATAGT
GAAGAATGGG CGGTGCCTGA GTTAACTACT GCTGCACGTC TGGCGGGTAA CCTGCAGAAA
CAGGCCCATC TGGCGGATAT CAGAAGAGAA GAAAATCGCT ATAAAGAACT GGCGGCAAAA
CTGGAAGCTG CTAATGCTGA ACTCGAAAAC TTTAACTGGA TCAGTGCACA TGACCTGAAA
GAACCACTGC GTAAAATACA GCTTTTCGCT TCCAGAACCT TCTATTCGGA AGTGTCGCTG
GACGTGTATA AAGACTCCCT GGTCAAAATA CAGAATGCCG CCTCCAAAAT ACAATTGCTA
CTGGACAGTA TGCTGTCTTT TGCTACCATG AGCAAGTCCA ACGAAGAATT TGAAAAAATA
AACCTCAATA ATACGCTTAC ACAGGTATTG GGGAAATACC GTAAGGAGAT CAATGCGAAA
GAGGCGGTTA TCACCACAGA TGCCCTGCCG CAACTAAGCG TATTGCCTTA TCAGGCAGAA
CAGCTATTCT CCAACCTGAT ATCTAATTCC CTGAAATTCT CTAAAGAAGA TGTACCACTG
AAACTGAATA TCAGTTATCA TCGCGGTCCC CGGCATCATA TTATTTCCTT CAGCGACAAT
GGCATCGGGT TTCATAACAA GTATGCCGAC ATCATTTTTA AGATCTTCCA GAGCCTGAAT
AAGGAGAATC AGTCTAATAT CGGTATCGGA CTGGCCATCT GTAAAAAGAT CATGGATAAT
CACAACGGGA TGATCTCTGC GGAGGGACAG GAAGGCCATG GCGCCGTGTT TAGCGTCTCC
TTTCCTTTAT GA
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| Protein sequence | MNIRSIVNKD NTNLLNCESE PIHIPGCIQE HGFLLGLAAD SLLIRYSSEN VFTYTGFTHQ
QLLGKPLQQL CSAEQEDLLR EFLTAASFDQ SQPFVFTINN VKYNTKPHIS NSTVILEFEP
FPDGTLDLPN LYKQTQQFVS YLNDAQDLRQ LCQSIAQETR AITGYDRVMI YRFDKNYNGE
VIAEAKQEEL LPLLGHNYPH TDIPAQARAL YLTNMLRMIV DVDYTPVPLY TIADEKEEKH
LDLSLSILRS VSPIHIEYLK NMGVKATLTI SLLQDNKLWG LISCHHYSQK NIPHYTRLSA
LLQGYFFTSQ IKVRQAADEY NYAQYIEDNI RPLLELMSTG DDFIAQHYHN TLLRDCIRAS
GFVIVQNDTI FRNGKVPPDR QLLPLLEWLK EHAGNGQFST DHLIAVYPPA EAMNDTAAGL
IYHALDSGGK NCALWLRPEM EKSINWAGNP SKGIVMDSAG ARLSPRKSFE LWKEVVKHYS
EEWAVPELTT AARLAGNLQK QAHLADIRRE ENRYKELAAK LEAANAELEN FNWISAHDLK
EPLRKIQLFA SRTFYSEVSL DVYKDSLVKI QNAASKIQLL LDSMLSFATM SKSNEEFEKI
NLNNTLTQVL GKYRKEINAK EAVITTDALP QLSVLPYQAE QLFSNLISNS LKFSKEDVPL
KLNISYHRGP RHHIISFSDN GIGFHNKYAD IIFKIFQSLN KENQSNIGIG LAICKKIMDN
HNGMISAEGQ EGHGAVFSVS FPL
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