| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4103 |
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| Symbol | |
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| ID | 8360276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5105060 |
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| End bp | 5106388 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966275 |
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| Product | protein of unknown function DUF21 |
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| Protein accession | YP_003123764 |
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| Protein GI | 256423111 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00110623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCTTAG ACATATTTTT CACCATCTTT CTGGTGCTGC TGAACGGTTT TTTTGTAGCA
GCAGAATTTG CGATTGTGAA AGTCCGATCG TCGCAGATCG AAGTAAGTGC GGGCCGCAGC
AAGACGGTTT CGCAGGTAGC CAAAAACATT GTCAATAATC TGGACGGTTA CCTTGCTGCA
ACACAGCTGG GTATCACGTT AGCTTCTCTC GGATTGGGCT GGGTTGGGGA AAAGGTAATG
ACTGAATTGA TCCTCAATAT ATTCCATGCT CTCAATTTCA ACATGCAGGA AGCTGTTGCG
CATAAGATTG CTATTCCTAT AGCGTTCCTG GGAATTACCA TTCTGCATAT CGTATTCGGT
GAACTGGCGC CAAAATCACT GGCCATCCGT AAACCTGTTC CTACGACATT TACAGTGGCG
CTGCCCCTGA AATTGTTTTA TGTAGTATTC AGACCGTTTA TCTGGATGCT GAACAGTTTT
GCCAACGTGA TCCTGCGTAT GGTAGGTATT CGTCCGGTAC ACGAGCACGA AGACATTCAC
ACAGAAGAAG AATTACGTGT AATCATAGCA GAAAGCCATC AGGGTGGTGT TATTGAGGAA
ACAGAAAAGG CGCTTATCCA GAACGTTTTC AATCTGGGAG ATCGTCATGT ATCTGCGTTG
ATGACCCCTC GTAATGAGGT GGTATGGCTG GACGTAGATG ATGATCCGGA AGTGAATAAG
GCGAAGATCC TGACGCAGAA ACATACTGTA TATCCGATCG CTAAAGGTGA TCTGGACCAT
ACGACCGGCT TTGTATATTC CAAAGACCTG TTGAGCGATA ACTTCAACGG CGCTGTCAAT
AACCTGGAAG CGATCAGCCG TAAACTGCTG GTGGTAACAG TACACAACCG TACCTATCAG
TTGCTGGAGC TCTTCAAACG TGAGAGGATC TATCAGGCAA TGGTGGTGGA CGAATTTGGT
TCCATTAAAG GTCTGGTGAC GATCAACGAT ATCGTGGATG CACTGGTAGG TAATATCTCT
GAAACGAATG AATTTGAATA TGAGGTAATT CGCAATGAAG ATGGTAGTAT CCTGGTGGAT
GGTCAGCTGC CGTTTGTTGA ATTCCTTGAA ATGATGGGTA TTGATGCAGA TCCGCAGAAG
GTAAACGTGA CGAATTTCGT GACCCTGGGT GGTTTCATCC TGGACAGAAT GGGTAAGATC
CCTGAGGCCG GCGATAGCAT CAACTGGCGT AACCTGAAGC TGGAAGTGAT CAAAATGGAT
CAGCACCGTA TCGCCAAGGT ACACATCTGT AATTTCGATA AAGACAAAGA GAAGGATGAC
AATAAATAA
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| Protein sequence | MTLDIFFTIF LVLLNGFFVA AEFAIVKVRS SQIEVSAGRS KTVSQVAKNI VNNLDGYLAA
TQLGITLASL GLGWVGEKVM TELILNIFHA LNFNMQEAVA HKIAIPIAFL GITILHIVFG
ELAPKSLAIR KPVPTTFTVA LPLKLFYVVF RPFIWMLNSF ANVILRMVGI RPVHEHEDIH
TEEELRVIIA ESHQGGVIEE TEKALIQNVF NLGDRHVSAL MTPRNEVVWL DVDDDPEVNK
AKILTQKHTV YPIAKGDLDH TTGFVYSKDL LSDNFNGAVN NLEAISRKLL VVTVHNRTYQ
LLELFKRERI YQAMVVDEFG SIKGLVTIND IVDALVGNIS ETNEFEYEVI RNEDGSILVD
GQLPFVEFLE MMGIDADPQK VNVTNFVTLG GFILDRMGKI PEAGDSINWR NLKLEVIKMD
QHRIAKVHIC NFDKDKEKDD NK
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