Gene Cpin_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4102 
Symbol 
ID8360275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5104660 
End bp5105016 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content46% 
IMG OID644966274 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003123763 
Protein GI256423110 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00149147 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAAGG AAAGCTCAAC TAATACATTG AACAGGAATA AGATACACTT AAATTGCGGC 
ATGGCCTATA CGCTGGATCT GATAGGTGGA AGGTGGAAGC CTAACATTCT TTGGGCCCTG
CTGGATGGCA AACTGCGGTA TAGTGAACTG AAAAAGGTGA TTCCTGACGT ATCCGAGCGC
ATCCTTGTAT TACAGCTAAG AGAGCTGGAA AAGGATGGTC TCATCACGAG ACTGGTGTAT
GCGGAAGTGC CACCGAGAGT GGAATATGAA CTCACAAACG ACGGACAATC AATGAAGCCG
ATGTTGGAAT GCATCTCTGA CTGGGGTGAT AAACATCGGC CTGAAAAGAC AAAATAG
 
Protein sequence
MRKESSTNTL NRNKIHLNCG MAYTLDLIGG RWKPNILWAL LDGKLRYSEL KKVIPDVSER 
ILVLQLRELE KDGLITRLVY AEVPPRVEYE LTNDGQSMKP MLECISDWGD KHRPEKTK