Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4102 |
Symbol | |
ID | 8360275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5104660 |
End bp | 5105016 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966274 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003123763 |
Protein GI | 256423110 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00149147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAAAGG AAAGCTCAAC TAATACATTG AACAGGAATA AGATACACTT AAATTGCGGC ATGGCCTATA CGCTGGATCT GATAGGTGGA AGGTGGAAGC CTAACATTCT TTGGGCCCTG CTGGATGGCA AACTGCGGTA TAGTGAACTG AAAAAGGTGA TTCCTGACGT ATCCGAGCGC ATCCTTGTAT TACAGCTAAG AGAGCTGGAA AAGGATGGTC TCATCACGAG ACTGGTGTAT GCGGAAGTGC CACCGAGAGT GGAATATGAA CTCACAAACG ACGGACAATC AATGAAGCCG ATGTTGGAAT GCATCTCTGA CTGGGGTGAT AAACATCGGC CTGAAAAGAC AAAATAG
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Protein sequence | MRKESSTNTL NRNKIHLNCG MAYTLDLIGG RWKPNILWAL LDGKLRYSEL KKVIPDVSER ILVLQLRELE KDGLITRLVY AEVPPRVEYE LTNDGQSMKP MLECISDWGD KHRPEKTK
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