| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4096 |
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| Symbol | |
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| ID | 8360269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5097192 |
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| End bp | 5098703 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966268 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_003123757 |
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| Protein GI | 256423104 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.559536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00132116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAGTAG GATTGACGCG TCAGCAATTA TATGACCGTA TCAGATCATC CACTAAAGAT
GAAGTTATTC TTGAGGAGAT GACCCGCCTC GGTTTCTGGG CAAAGAACAC AAGTATGCCA
TCTCCTTCGG AGGTGCTTAT CCGCAGAGAA AGTGAGTTGC GCAGGGAACT GAATAAGTTA
GTAGAAGAAA AGCAACGTTA TCGTAACCGT GAGCAGATGC TGAACGAAAT GCGCAAACAG
CGTATGGCGG CAGCAAAAGC AAGAAGAGCG GAAACGAAAA AGCGTAATGA GGAGAAGCGT
AAAGAGAGAG CCGCACAATG GGCGATTGAA AAAGAAAAGA GTATTGTATA CTTGGGAGAA
GATGTTTCTG CCGGTTTAAA TAAAGTAGTT TCCGACGAAC AGAAGCTAAC CACTGCTGGG
CTGCCCGTAT GCCATGATGG TATCGCGTTG GCTGCAGCGA TGGGAATTAG TATCGGTAAA
TTACGTTTCC TCTCTTTTAA CAGGAAAGTA GCCAGTGTAA CACATTACAA GCGCTTTTAT
ATTCCTAAGA AGTCAGGCGG TAAACGACTG ATCTCAGCGC CGATGCCACA GTTAAAAGCG
GCGCAATACT GGATCCTGGA GAATATTCTC TATAAAGTAA AACTCAGTGA AGCGGCACAT
GGATTTGTAC CACAAAAGTC TATTGTGACG AATGCGGCTA ATCACGTCGG ACAGGATATT
GTTATCAATA TTGATCTGCG CGATTTCTTC CCTACGCTCG ACTATAAGCG AGTGAAAGGA
ATGTTCAATA AATTCGGTTA CAGCGAACAG GTAGCCACTA TCCTGGCGTT ACTGTGTACA
GAGCCTGAAA TGGAGCCGGT GACACTGGAC GGAAAAGACT ATCATGTGGC TACAACTGCG
CGGCACCTGC CACAGGGAGC GCCATGTAGT CCGGCGATCA CTAATATCAT TTGTTATAAA
ATGGACCGCA GGTTTGAAGG ACTGGCGCGT CGTTTTAATT ATACCTACAC CCGTTATGCA
GATGATATGA CTTTCTCTGC AAAAGAGGGC GCTGCCGCTG ATGCGGGAAA ACTGATATGG
GGCGTTAAGC AGGTGGTAAA AGAAGAAGGA TTTGTGATCC ACCCTGACAA ACTGAAGGTG
ATGCGCAAAG GCGATAAGCG GGAAGTGACA GGTGTGGTGG TAAATGAGAA GCTGAGCATT
GACAGGGAAA CACTCAGGAA GTTCAGGGCC CTCCTCCACC AGATCGGTGT ATCAGGTATT
GCTGATAAGC AATGGGGCAA GGGCGGTATT ATCAACAGCA TAGAAGGTTA TATCAACTAT
GTACAGATGG TAAAACCTGA AGCAGGTAAA CAACTGAAAA CGAAATGGCA GGCCCTGCTG
GGTCGGGAAG ATATAAAAAG CCAGGTACCT GCATCTAAAA ACAATACCGC ACCTATCATC
ATTCCTACGG CACTGCCACC AGTGCAGGAT CCTCCTAAGG ATGGCGAGAA ACCATGGTGG
GATGTTATGT AA
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| Protein sequence | MAVGLTRQQL YDRIRSSTKD EVILEEMTRL GFWAKNTSMP SPSEVLIRRE SELRRELNKL
VEEKQRYRNR EQMLNEMRKQ RMAAAKARRA ETKKRNEEKR KERAAQWAIE KEKSIVYLGE
DVSAGLNKVV SDEQKLTTAG LPVCHDGIAL AAAMGISIGK LRFLSFNRKV ASVTHYKRFY
IPKKSGGKRL ISAPMPQLKA AQYWILENIL YKVKLSEAAH GFVPQKSIVT NAANHVGQDI
VINIDLRDFF PTLDYKRVKG MFNKFGYSEQ VATILALLCT EPEMEPVTLD GKDYHVATTA
RHLPQGAPCS PAITNIICYK MDRRFEGLAR RFNYTYTRYA DDMTFSAKEG AAADAGKLIW
GVKQVVKEEG FVIHPDKLKV MRKGDKREVT GVVVNEKLSI DRETLRKFRA LLHQIGVSGI
ADKQWGKGGI INSIEGYINY VQMVKPEAGK QLKTKWQALL GREDIKSQVP ASKNNTAPII
IPTALPPVQD PPKDGEKPWW DVM
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