Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4093 |
Symbol | |
ID | 8360266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5091286 |
End bp | 5091684 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966265 |
Product | DoxX family protein |
Protein accession | YP_003123754 |
Protein GI | 256423101 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.823139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00207973 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCAACA ACACAACCTC CTTTCTGATA GTGCGCCTCG CCATTGGCGC CAGCATGTTT GGTCACGGAC TCGTAAGATT ACCAAAACTG GATAAATTCA GTGCATGGAT GGTAGGTAGT TTCAAAGACG CCATGTTACC CGCAGCACTG GTTACACCTT TTAGTTATGC GCTGCCCATC GCAGAATTCC TGATCGGCCT CCTGCTGATT ATTGGTTTAC TGACAAGACA AACGCTGGTA GCCGGGGGTA TTGTAATGAT ACTACTGATA TTAGGCACTA CACTGATAGA AAACTGGGAG GCCCTGGTAT CACAACTCCT TCATGCAGTC ATTTTTGCCT TGCTGCTGAG CAGCATTTCC TATAACAGTT ACGCAGTCGA TAACCTCTTC AAGAAATAA
|
Protein sequence | MINNTTSFLI VRLAIGASMF GHGLVRLPKL DKFSAWMVGS FKDAMLPAAL VTPFSYALPI AEFLIGLLLI IGLLTRQTLV AGGIVMILLI LGTTLIENWE ALVSQLLHAV IFALLLSSIS YNSYAVDNLF KK
|
| |