| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4090 |
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| Symbol | |
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| ID | 8360263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5088221 |
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| End bp | 5089660 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966262 |
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| Product | histidine kinase |
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| Protein accession | YP_003123751 |
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| Protein GI | 256423098 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.789598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00345949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAAGG TTAGCAGAAA GATATGGTGG ATCGCTACGC CGGCGTTACT GGCAGCATTA
CTGTTCCAGT TATACTGGCT GAGGCAAACA TACCGGTCGC AGCAGGAAGC ATTTGTAGCC
ACAGCTACGG AGGCATTCCA CAGCGCCTAT GACCACTCAA TCATTATCAC CGCCCGTCTC
AAGGCAGGTG TAGAACCCAA GGAAAAAAGA CGGTATTCCA TACAAACAAC CATTGACCTG
GACGAAAATG GTAATACACC GGCAGAAGGG ATGCCCAGGG CCAAGAGAGT GATCCGTTAT
AACAGCAATG CAGGAACGCC GCCGCCCGGC GGACCGAAAG ACATCCATAT CGATAGTACG
ATGGCTAATC AGCAGATGCG CCTGGATGAA ACGCCTCCTT CACTGGCCCA TTTTGTATCC
ACCATCTTTT CCTCTTTCAC GGATGTTGTC CCAGATAAAG ATACCCTTCG TAAGTATTAC
AGGTCTGAGC TGAATCAGAA GGAAATTCCG CTGCCTTTTA ATATACAGAC CAATAGCAAG
GAAATAGATA CTATCAATCA ACGGCCCTCA CTGATCATTC GTCCTGGCCT TAATAAACCA
GACCATCTTA TAGGCATCTC ATTTGAAGGA CTGCCTGCAT ACCTGTTGAA GAAAATGAGC
AGCGCCATTA TCCTGTCTGT ATTCATCGCC TTTCTGATCA CCGGTTGTAT CTGGACCTTA
TGGCGTATTA TCCTCCGGCA GGAAAAACTG GAACGAATGA AACGGGAGTT TATCAGTCAT
GTGACGCATG AACTGAAAAC ACCGGTCTCT ATCCTGCAAG CCACTAATGA GGCGCTGTTA
AGCTTTCAGG GAATGAATGA CGCAGAGAAA ACAGCCCGTT ATCTGCGGCA TTCCCGCGCA
GAACTGAACA GACTTCAGGA CCTGATTGAC AAGATTATGC AGGTGAGCAG GGAAGAACAG
GAACAGGAAG CCCTGCATAT CACGGAAACT GATATAGGGA CACTGATAGA CGAAAGTATT
AACCGTTTCG GGCACCTGCC ACAGGTTACT ATTAAACAGC AGGCAGAGAT CACCCATACC
CGTTTAAACA CAGATGCTGC TGCCTTTACC ACCATTCTCA CCAACCTGAT AGACAATGCG
GTCAAGTACA ATGACAAGCC TGTGCGTGAA GTGCTGATTG CAGCCAAAGA ATATCCGGGA
CATTATACCT TCAGTGTAAA AGACAACGGG AATGGCATTG AAAAGCAGCA CTTTCCGTTT
CTGTATGATA AATTCTACCG CGTGGTGCAG GGAGATACAC ATGATATCAA AGGCTACGGT
CTTGGCCTCA GTCATGTAAA AGCACTTTTG CAACAACTCA ATGGTAGTAT CGCGGTTACC
AGTAGTCCTG GTAATGGCAG TACCTTTACT TTCCAATTGC CGAAATATGA AAAAGATTAA
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| Protein sequence | MGKVSRKIWW IATPALLAAL LFQLYWLRQT YRSQQEAFVA TATEAFHSAY DHSIIITARL
KAGVEPKEKR RYSIQTTIDL DENGNTPAEG MPRAKRVIRY NSNAGTPPPG GPKDIHIDST
MANQQMRLDE TPPSLAHFVS TIFSSFTDVV PDKDTLRKYY RSELNQKEIP LPFNIQTNSK
EIDTINQRPS LIIRPGLNKP DHLIGISFEG LPAYLLKKMS SAIILSVFIA FLITGCIWTL
WRIILRQEKL ERMKREFISH VTHELKTPVS ILQATNEALL SFQGMNDAEK TARYLRHSRA
ELNRLQDLID KIMQVSREEQ EQEALHITET DIGTLIDESI NRFGHLPQVT IKQQAEITHT
RLNTDAAAFT TILTNLIDNA VKYNDKPVRE VLIAAKEYPG HYTFSVKDNG NGIEKQHFPF
LYDKFYRVVQ GDTHDIKGYG LGLSHVKALL QQLNGSIAVT SSPGNGSTFT FQLPKYEKD
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