| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4085 |
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| Symbol | |
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| ID | 8360258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5080275 |
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| End bp | 5081402 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966257 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003123746 |
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| Protein GI | 256423093 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.650553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00778785 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACTT TTGTAAATAA TCCTTCCAGG CTGAACTGGC TCTACCGGTA CAAACTTTAT
CACATTCCTT TCTGGGCCGC CTATCACTTT ATGTGGTGGA CGGTGGCCAT CGGGAATCCG
TTTAAAGCTG CCGATGCAAT ATTTCTGACG CCTTATGTGA TGAAATTCCT GTTTTACGTC
GTTTTTCAGG CTTTGGCTGC ATATTTCAAT CTCTACTACC TGATCCCGAA ATACCTTGAA
AAAGGCCGCT TTACGCTCTA TATAAGCTAT CTTTTACTGA CGATCGTCAC AGCCTCATTG
CTGATCGTTC CCGGATATTA CCTGAGTGCA TGGCTATCTG GAAAAACAAT GCAGGAAGCT
TATGGCAATA ACGGCGATTG TTTTTACCAG TTTCTCGGCA ATTCTATCCC GTCTACACTG
GCTGCCATGA CACTCGCGAT GAGTATCAAA CTGGGTAAAA ACTGGTTACA AACGCAACGA
AAGCAGCAAA TGCTGGAAAA GGAGAAACTG GAAACGGAGC TGAATTTCCT GAAACACCAG
TTCAATCCTC ATTTTCTGTT TAATACCATC AATTCGATTT TCTTCCTGAT ACATAAGAAT
CCGGATATGG CTTCAGCATC CCTGGCGAAA TTCTCAGAAC TGTTACGGTA TCAGTTGTAC
GAGTGTAATG ATAAACAGAT CCTGCTGGCG AGGGAAATTT CCTATATGGA AAACTCCATA
GAACTGGAGC GCCTGCGGCA GAATGACAAT ATGGAGCTGA ATGTGAAGGT TGAACAGGAA
GAAGCCGGAC AATGGGGTAT TGCGCCATTT ATTCTGATGA CCTTTGTGGA GAATGCCTTT
AAACATGTAT CCATACATAT GGACAGACCG AACTGGATCC GGATTGAGCT GGAACAACGC
GGAGATACGC TGACATTCCT GGTATCTAAC AGTACTTCTG AGGTCGCATC CAGGGATGTT
GTGCAGTGCG GGGGTATCGG ACTTAAAAAT GTACAGCGCC GACTGGACCT TATTTATGCC
GGACAATACC AGCTGGATAT CTGCCAGGAT ACGCACCGTT TTGACGTCCA GCTTCAACTG
CGGCTTTCTC CGCTTGAAAT GCCTCAACCT TTACAGAAAA CAGCCTGA
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| Protein sequence | MNTFVNNPSR LNWLYRYKLY HIPFWAAYHF MWWTVAIGNP FKAADAIFLT PYVMKFLFYV
VFQALAAYFN LYYLIPKYLE KGRFTLYISY LLLTIVTASL LIVPGYYLSA WLSGKTMQEA
YGNNGDCFYQ FLGNSIPSTL AAMTLAMSIK LGKNWLQTQR KQQMLEKEKL ETELNFLKHQ
FNPHFLFNTI NSIFFLIHKN PDMASASLAK FSELLRYQLY ECNDKQILLA REISYMENSI
ELERLRQNDN MELNVKVEQE EAGQWGIAPF ILMTFVENAF KHVSIHMDRP NWIRIELEQR
GDTLTFLVSN STSEVASRDV VQCGGIGLKN VQRRLDLIYA GQYQLDICQD THRFDVQLQL
RLSPLEMPQP LQKTA
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