| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4084 |
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| Symbol | |
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| ID | 8360257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5079530 |
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| End bp | 5080264 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644966256 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003123745 |
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| Protein GI | 256423092 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.445273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0209217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGTG TAATTATAGA CGACGAACCG CTGGCCAGGG AAGGACTTTC CAGTTATGTC
CGGGAGGTCG ATTTCCTGCA ACTTGTCGCT ACCTGTACCA ACCCTGTTGA GCTGATCAGG
TTACTGGATG AACATCCGGT AGATCTTATT TTTCTGGATA TCCAGATGCC GAAAATGAAC
GGGATCGACT TTCTGAAAAT CGTTCAGAAA CCACCGATGG TGATTATTAC TACTGCATTT
CCCAGTTATG CACTGGAAGG TTTTCAATTG AATGTGATGG ATTACCTGCT GAAACCCATT
ACGTTTGATC GCTTTTTTAA AGCTGCGAAT AAGGCGAAAG ATTATTATCA GCTGTTACAT
AAACCAGTTG GTGAGGCGGC TAAAACAGCG AAAACGGAGG ACTACTTTTT TATTAAATGC
GGGAGCAAGT ACGAAAAGAT CTTCTTTGAC GATATTCTTT ATGTGCAGGG TATGCAGAAC
TATGTCACCA TACATACCCG TAAGGGCAAA TATATGACTT TACTGTATCT GAAGAATCTT
GAAGAGAACC TTGACAGGAA GGCGTTTATA AGGGTACATA AATCCTATAT TGTTGCGGTC
AGCAAGATTG AGGGGATCGA AGGCAATGAG ATCTTTATTC AGTCTGATAA AATTCCTATC
AGCAGGAATT ATCACGACAT GGTGATTGAG CAGGTGGTGA AAAATAAGCT CTGGGATAAG
ATCAGGTTTT CCTGA
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| Protein sequence | MNCVIIDDEP LAREGLSSYV REVDFLQLVA TCTNPVELIR LLDEHPVDLI FLDIQMPKMN
GIDFLKIVQK PPMVIITTAF PSYALEGFQL NVMDYLLKPI TFDRFFKAAN KAKDYYQLLH
KPVGEAAKTA KTEDYFFIKC GSKYEKIFFD DILYVQGMQN YVTIHTRKGK YMTLLYLKNL
EENLDRKAFI RVHKSYIVAV SKIEGIEGNE IFIQSDKIPI SRNYHDMVIE QVVKNKLWDK
IRFS
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