| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4080 |
|---|
| Symbol | |
|---|
| ID | 8360253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5075801 |
|---|
| End bp | 5076361 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644966252 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_003123741 |
|---|
| Protein GI | 256423088 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0440178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0878712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCA AGATTCTTGG TATCTCCGGT AGCCTCCGGA GCGCTTCTTC AAATACTTCA
TTATTAAGAG CCTGCGCAGC AATTGCGCCT GCAGACATGG TATTTTCTAT TTATGATGGC
CTGGATAAAC TGCCTTATTT CAGTCCGGAA CTGGATACGG AACAATCCAC AGCACCTTTA
ACCGTAGCCG ATCTCAGGCA GCAGGTACAG GCTGCGGATG CTGTTGTATT CAGTACACCC
GAATATGCTT TTGGCATACC GGGCGTACTG AAAAACGCAC TGGACTGGCT GGTATCTTCA
GGCGAGTTTA CGCATAAGCC GACCGTGGTG ATCAGCGCAT CTCCGCTTGC TACGGGTGGC
GAAAAAGCGC ATGCTTCACT GGTACAGACT TTAACTGTGA TGACTGCTGA TATCCGCGAG
GAATACAAGC TGATCATACC TGTAATACGT ACCAAAATAA ATCCTGAAGG AATATTGACC
GATGCTGTGC TGGAAAAGAC TTTACGGACG CTGATAAGTG ACCTCGCAGC GGCTAAAAGC
GCCAGCGAAG ACCAACATTA G
|
|---|
| Protein sequence | MAFKILGISG SLRSASSNTS LLRACAAIAP ADMVFSIYDG LDKLPYFSPE LDTEQSTAPL
TVADLRQQVQ AADAVVFSTP EYAFGIPGVL KNALDWLVSS GEFTHKPTVV ISASPLATGG
EKAHASLVQT LTVMTADIRE EYKLIIPVIR TKINPEGILT DAVLEKTLRT LISDLAAAKS
ASEDQH
|
|---|
| |