| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4069 |
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| Symbol | |
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| ID | 8360242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5058707 |
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| End bp | 5061181 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966241 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003123730 |
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| Protein GI | 256423077 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0444701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.141518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA TTGTCTCTTT ATGTTTGGGA ATGATGCTCA CATTCCTTTC GATCGTCCAC
GCACAGCAAC CGGGTCAAAA ACCGGCGGAA AACGGCTCCC TATACGGAAA ACTCGTCGAT
GCAACTACCA ACGCCCCCGT TGAATATGCC TCCGTCGCCC TGCTCCGTGC AGCAGATTCC
AGTGTTGCTA CCGGTATGTT ATCAAAACCA AACGGTGATT TCAACTTTCC TGAAATTCCT
TTAGGTAAAT ATATCATGAA GGTAAATTTT ATCGGGTATG GAACCGTTTA TAAAACAATT
TCAATTACAG GTAAAAATAA TAGTGTAGAT ATTGGTAATA TTAAATTGAG TGCAAATGTA
AGATCCCTGG CGGGTGTAGA GATCGTTTCA GAGAAACCTT CTTTCCAGAT GGCGATCGAC
AAACGCGTCT TCAATGTGGA TAAAAATATT TCCAATGTGG GTGGTACCGC AACAGATGTA
TTGAAACAGG TGCCGTCTGT CAACGTAGAT ATTGATGGTA ATGTGAGCGT ACGTAACGGC
TCTCCGACCA TCTTTGTGGA TGGCCGCCCT ACTACCCTCA CCCTGGATCA GATCCCGGCT
GATGCCATCG CCTCCGTAGA GGTGGTGACC AACCCTTCCG CCAAATACGA CGCAGAAGGT
GTCAGCGGTA TCCTCAATAT TGTATTGAAA AAGAACCGTA AGGCAGGTAT CAACGGTCAG
GTTACCGGTG GTCTTTCTTC TATCGGCGGT GGTAACGTAG GCGCAGACCT TAACATCCGC
AGAGAGAAAT ATAACCTTTC CCTCAGCTAT AACCTGAGAA GCCGTCAGGG CAATGCCCGC
TCCCACCTGT TCCGTAAAAA TATCGGCGCA GACACCACGA CTTTCCTGGA TCAATATAAT
GAAGGCGAAA ATGGTCGTCG TTTCCAGTTC GGACGCGTTG GTTTTGACTG GTTCATGGAT
AACCGCAATA CCTTCACCAT CGCCCAGGGT ATCATGGCAG GTGATTTCAA AGACAACAGC
GACCTGACAT TATATGACCT GGACGCTAAC AGAAACCAGG TACGTTATGG TACCGGTATC
GATAACTCCA ATCACAACTT CCGTAATTAC AGCACCCAGA TCGGCTATAA GCACACCTTC
GCCAAACAAG GCCATGAGCT GACTGCCGAC TTTAACTATA ACTACGCGAC ATCCAAAGAT
AATTCCGACT ATTCCTTACA ATATTATAGT CTGGGCCATC AGCCGATCGA CTCTCCGAAT
ATCCCGCAGG CACGTTATGG CCGCGGTGCT GGTAATACCA CCTATATTAC TGGTCAGATC
GATTATGTAA ACCCGTTGAC AGAGAATTCC AAGATCGAGG CAGGTCTGCG TACCACGACC
CGTAAGTTCA ATAACGAACT GACCACCATG GGCAGAGATT TCACGACCGG TCGCGATGTA
CTGGATTCTT CTCTCTCCAA TGACTACCGT TATTCTGAAA CCATCAATGC CGCTTACGCC
AGCTACTCCG GTACTATCGG CAATTTTGGC TACCAGGGTG GTCTGCGTGC AGAACAGTCC
TTCTACGACG GTGAAACAAG GGTACTGAGT AAAAGCAGCT ATAAAATTGA TTATCCGATC
AGTTTCTTCC CAAGCCTGTT CCTTTCTCAG AAATTCAAAG GAGATCACGA ACTGCAGCTG
AATTATAGCC GCCGTGTACG TCGTCCATGG TTCCGCGACC TGTTGCCTAA CCTGGAATAC
ACCGCACAGA GCGCCAACCG CGGTAACCCG GCGCTACGTC CTGAGTTTAC CAACTCATTT
GAATTAAGTT ATCTGAAAGA TTTCAATCGA AAACATAACG TATTGGTATC GCTTTACTTC
AGAAATACTG AAAAAGCTAT CACTGATTTC TATACAGATA CGACCCTGAA CATCAATGGT
CAGGATCAGA AAGTGGTGTT GTCCTACCCG GTGAATGCCA ACACCCGTAA TGCTTATGGT
GCCGAGTTCA CCGTACGTAA CCAGATCATG AAAGGCTGGG ATATCACCAC CAATTTAAAC
CTGGCGCAGC AGAAGATCAA TGCCGGTAAC CTTCAGAGCA ACCTGACCAA TCAGGGCTTT
ATCTGGTTCG GTAAAGTAAA CAGTAATACC AAACTGCCGT GGAATACAAC CCTGCAGTTG
ACGGGTAACT ATGAGTCCAA GCAGATCCTG CCACAGGGCG AAAGAGCGGC ACAGTATTCT
GCGGATGTAG CTTTACGCAG AGAGTTCCTG AAGAAAAAGA ACCTGGTAGT ATCCCTGGCA
CTGAACGATA TCTTCAATAC AGATCGTAAC CTGTCATTTA CCAATACCGC CTTCTCCGAA
CAGGAAAGAT ACCGTAAGCG CGCTACCCGT GAACTGCGTC TGAACGTGTC TTACAGATTT
GGTAAAATGG ATACAAAAGA GCGTAAAAAC GGTAAAAAAC AAGATCAGCA GGAAAACAAT
CAAGGAGAAT TTTAA
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| Protein sequence | MQKIVSLCLG MMLTFLSIVH AQQPGQKPAE NGSLYGKLVD ATTNAPVEYA SVALLRAADS
SVATGMLSKP NGDFNFPEIP LGKYIMKVNF IGYGTVYKTI SITGKNNSVD IGNIKLSANV
RSLAGVEIVS EKPSFQMAID KRVFNVDKNI SNVGGTATDV LKQVPSVNVD IDGNVSVRNG
SPTIFVDGRP TTLTLDQIPA DAIASVEVVT NPSAKYDAEG VSGILNIVLK KNRKAGINGQ
VTGGLSSIGG GNVGADLNIR REKYNLSLSY NLRSRQGNAR SHLFRKNIGA DTTTFLDQYN
EGENGRRFQF GRVGFDWFMD NRNTFTIAQG IMAGDFKDNS DLTLYDLDAN RNQVRYGTGI
DNSNHNFRNY STQIGYKHTF AKQGHELTAD FNYNYATSKD NSDYSLQYYS LGHQPIDSPN
IPQARYGRGA GNTTYITGQI DYVNPLTENS KIEAGLRTTT RKFNNELTTM GRDFTTGRDV
LDSSLSNDYR YSETINAAYA SYSGTIGNFG YQGGLRAEQS FYDGETRVLS KSSYKIDYPI
SFFPSLFLSQ KFKGDHELQL NYSRRVRRPW FRDLLPNLEY TAQSANRGNP ALRPEFTNSF
ELSYLKDFNR KHNVLVSLYF RNTEKAITDF YTDTTLNING QDQKVVLSYP VNANTRNAYG
AEFTVRNQIM KGWDITTNLN LAQQKINAGN LQSNLTNQGF IWFGKVNSNT KLPWNTTLQL
TGNYESKQIL PQGERAAQYS ADVALRREFL KKKNLVVSLA LNDIFNTDRN LSFTNTAFSE
QERYRKRATR ELRLNVSYRF GKMDTKERKN GKKQDQQENN QGEF
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