| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4056 |
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| Symbol | |
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| ID | 8360229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5045108 |
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| End bp | 5046364 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966228 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003123717 |
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| Protein GI | 256423064 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.153991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0464079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGGA TACAGGAGAA ACTTGCGATA CTGGCAGATG CGGCGAAATA TGATGCGTCG
TGTGCTTCGA GTGGCAGTAA CCGGAAAAAC GAAACCAAGG GATTGGGCAA TGCGCATCCG
GGTATGGGAA TTTGTCATTC ATATACAGCA GATGGTCGTT GTGTGTCGTT ACTGAAGATA
TTGCTGACAA ATGTCTGCAT TTATGATTGT GCCTACTGTG TATCCCGTAG AAGTAATGAT
ATTAAGCGGG CGGCATTCAC GGTACAGGAA GTAGTAGACC TGACCATAAA CTTTTACCGT
CGGAACTATA TAGAGGGGCT TTTTTTGAGT TCCGGTATTT TTAAAGATCC GGATTATACG
ATGGAGAGGT TAGTGAGAGT GGCTAAAAAG CTTCGAACGG AGCATAATTT CAATGGATAT
ATTCATTTGA AAGCGATTCC TGGTGCAAGT GATGAATTAA TGAGAGAGGC GGGGTTGTAT
GCAGATCGTT TGAGCGTCAA TTTAGAGTTG CCGACAGAAG CAGGGTTAAA ATTGCTGGCT
CCGGAGAAGA ACCGGCCGGC TATGATTCAA CCGATCCGTT TTTTGCAGAA TGAGATTATT
CGGCTGGAAG ATGAACGGAA GGTGTTGAAG AAGGTGCCGA CTTTTGTTCC GGCAGGACAG
AGTACGCAGG TAATAGTAGG TGCGGCGGGT GAGTCGGATA TGGAAATCAT GCACCTGGCT
TCCCGTTTTT ATAGACAATT CCAGCTGAAA CGTGTGTATT ATTCTGGCTA TGTGCCGATC
AGCAATGATA ACAGATTACC TGCCTTACAT AGCCAGGTGC CGTTGATGCG GGAAAACCGG
TTGTATCAGG CTGACTGGCT CTTACGTTTT TATGGTTTTG AACCTCATGA ATTATTGAAT
GAAAGACATC CGAATCTTGA TACGGATATT GACCCCAAAC TCTCCTGGGC GTTACGGAAT
CTGGACAGTT TTCCAGTAGA CATTAATAAG GCTGATAAGA TGCTGATTGC CAGGGTACCG
GGCATCGGTA TTGAAAGTCT GCGTAAAATA TGCGCAGCGC GTATGCATGG TACACTGAAT
TGGGATCAGC TGAAACAGAT GGGTGTTCAG ATTGGAAAGG CGAGATATTT TATTACGTGT
AAATCCGGTC CTCTCGAAAG ACGGGATCTG ACACCGGAAC AGATACGTCG GCAACTGCTG
GCACAGTCCC ACAGTAAATG GGCGAAAGCT CATAGTCCGC AGTTGCAGTT ATTTTGA
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| Protein sequence | MERIQEKLAI LADAAKYDAS CASSGSNRKN ETKGLGNAHP GMGICHSYTA DGRCVSLLKI
LLTNVCIYDC AYCVSRRSND IKRAAFTVQE VVDLTINFYR RNYIEGLFLS SGIFKDPDYT
MERLVRVAKK LRTEHNFNGY IHLKAIPGAS DELMREAGLY ADRLSVNLEL PTEAGLKLLA
PEKNRPAMIQ PIRFLQNEII RLEDERKVLK KVPTFVPAGQ STQVIVGAAG ESDMEIMHLA
SRFYRQFQLK RVYYSGYVPI SNDNRLPALH SQVPLMRENR LYQADWLLRF YGFEPHELLN
ERHPNLDTDI DPKLSWALRN LDSFPVDINK ADKMLIARVP GIGIESLRKI CAARMHGTLN
WDQLKQMGVQ IGKARYFITC KSGPLERRDL TPEQIRRQLL AQSHSKWAKA HSPQLQLF
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