Gene Cpin_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4046 
Symbol 
ID8360219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5034097 
End bp5035179 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content50% 
IMG OID644966218 
ProductCytochrome-c peroxidase 
Protein accessionYP_003123707 
Protein GI256423054 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.399285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0466935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAG GCGGGTATAA GATATTGAGT TCCTTATTAC TGGTGGCCGG ATTGTCCATC 
GCAGGGTTCC GCAGGCAGGG ACCTGAACCC CTGCGTATTG ACTATCCGGC TTACTATGGC
AACAGGATTT TCGTGCCGGA GGATAACCCG ACTACGGTGG AAGGTGTGGC GCTGGGCAGA
CGTTTGTTTT ATGAAAAGGC ATTGTCTGCC AGTCAGCAGA TTTCCTGTGG TACCTGTCAC
CGGCAGGAAC TGGCATTTAC AGATGGAAAG GTATTCAGTA CGGGCGTGGA TGGGAGTCTG
CAGCCCCGTA ATACCATGTC GCTGGTCAAC CTGTTGTGGG TACGTAACTT TTTCTGGGAT
GGCAGGGCAG CCGGATTGGA AATGCAGGCA GCGGTACCAT TAACGAATAC ACATGAAATG
GGACAATCAC TGGAGGTATC CGCGGCGCTC CTCTCGAAAG AGTCGGTGTA TAGATCCTTA
TTCAGCAAGG CTTTCGGCGC GGACAGTATA ACAGGAGAGG GGATTGTAAA AGCCCTTTCG
CAGTTTGAGC GTACGCTGGT TTCTGCGAAT GCGCCTTACG ACCGTTACCT GCGTGGTGCG
TATCAGCCGA CAGCTGCTGA GTTGAATGGC ATCAGTCTTT TTTATGGGAA TCCGGATGTA
AACAGCAACG TACGCGGTGC AGGTTGTGCA CATTGTCATG GCGGACCGAA GACATATATC
GAGTTATATC ATAATAATGG ACTGGATGCG ATACCTGCTG ATTCGGGCCG CGAAAAAGTA
AGTGGTCAGT CTTATGACCG GGGTCGCTTC CGGGTGGTGT CATTACGGAA TATTGCTCTG
ACAGCACCTT ATATGCATGA TGGGAGGTTT AAAACCCTGG AGGAGGTTTT GTCTCACTAT
AACGAGCATA TTAAACCGAG TAAGACATTA AGTCCGTTTT TACAAGGAGT AGGTAATTCG
AATGCGCCGG ATGGATTGAC ACTTGGATTA ACGGCTGCTG AGAAAAAGGA CCTGCTGGCG
TTTCTGCATA TGCTGACGGA TTCGACCTTT ATCACCGATA AAAGGTATTC CGATCCTTTT
TAG
 
Protein sequence
MQAGGYKILS SLLLVAGLSI AGFRRQGPEP LRIDYPAYYG NRIFVPEDNP TTVEGVALGR 
RLFYEKALSA SQQISCGTCH RQELAFTDGK VFSTGVDGSL QPRNTMSLVN LLWVRNFFWD
GRAAGLEMQA AVPLTNTHEM GQSLEVSAAL LSKESVYRSL FSKAFGADSI TGEGIVKALS
QFERTLVSAN APYDRYLRGA YQPTAAELNG ISLFYGNPDV NSNVRGAGCA HCHGGPKTYI
ELYHNNGLDA IPADSGREKV SGQSYDRGRF RVVSLRNIAL TAPYMHDGRF KTLEEVLSHY
NEHIKPSKTL SPFLQGVGNS NAPDGLTLGL TAAEKKDLLA FLHMLTDSTF ITDKRYSDPF