Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4036 |
Symbol | |
ID | 8360209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5021442 |
End bp | 5021798 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644966209 |
Product | protein of unknown function UPF0102 |
Protein accession | YP_003123698 |
Protein GI | 256423045 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.261027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0798574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCC ATATAGCTTT GGGCAAAAAA GGGGAGTTGA TTGCATGTGG ACATCTTCGT TTGCATCATT ACGAGATCAT AGCGGTTAAT TGGCGGCATC GGCGGCGGGA GATAGATATT ATCGCTTCGC GGGATGGTTG TCTGGTGTTT TTCGAGGTCA AGACGCTGGC AAGTGATCTT TACGGCTGGC CGGAGAAGCA TGTGACGGCG GCGAAGCGGC GGAATATACA GGCTGTGGCT TCGGCGTATA TGGACCGGAT GAAACAGCTG CCGAAGGTCA TCAGGTTTGA TGTGATTGCG ATTACTTTTC AGCCGGATGG TACTTATGAG CTGGTGCATT TTGAGGATGC GTTTTAG
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Protein sequence | MASHIALGKK GELIACGHLR LHHYEIIAVN WRHRRREIDI IASRDGCLVF FEVKTLASDL YGWPEKHVTA AKRRNIQAVA SAYMDRMKQL PKVIRFDVIA ITFQPDGTYE LVHFEDAF
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