Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4028 |
Symbol | |
ID | 8360201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5011644 |
End bp | 5013842 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966201 |
Product | peptidase S9B dipeptidylpeptidase IV domain protein |
Protein accession | YP_003123690 |
Protein GI | 256423037 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.210313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.469025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAC GTTATTTCAG CTGCCCTGGA AGCAGGGTAC TCACTTTTTT AGTCTGTATG GTCGCAGGTA GTGCCAGTGC ACAGCCATGG AAACATGTGA AATGGTCCGG CGACGGAAAG ACTTTTTACC AGACGGAAGA CAATGGCGGT ATTGCCGCGT ATAGCGCCAA AGACGGTCAG TCTACCCAGA AGATCGCTCC GGCCCTCCTG ACGCCCAAAG GGCAGTCAGT ACTTGAAATA GAAGATTTCT CCTATACACC GGATGAAAAA AAGTGGCTGA TTTATACAAA AGCGCAGAAA GTATGGCGCT ATAAAACCCG TGGCGACTAC TGGGTGCTGG ATATTGCCAG CGGTAAACTG GTACAACTGG GTAAAGGATT ACCCGCCTCT TCCCTAATGT TTGCGAAATT TTCTCCCGAT GGACAGAAAG TTGCTTACGT CAGCGAACAT AATCTCTATG TAGAAGAACT CGCTACTCAT AAAATCAAGG CACTGACAAA AGATGGTACC CGTCGTCTTA TCAACGGTAC TTTTGACTGG GCATATGAAG AGGAGTTTGA CTGTCGCGAT GGTTTCCGCT GGAGCCCGGA CAGCCGTGCA ATCGCTTACT GGCAGATTGA TGCCCGTAAG ATCAGGGACT TCCTGATGAT CGATAATACC GATTCCCTGT ATTCCTACAC CGTTCCGGTA GAATATCCTA AAGCAGGTGA AAGTCCGTCT GCCTGCCGCG TAGGTGTGGT AGATATTACA ACCGCCAAAA CGATCTGGTT GCAGGTTCCC GGTGATGCGC AGCAGCATTA TATTACCCGT ATGGAGTGGA ATCCTGCCCG TACCGGTCTG ATATTGCAGC AGCTGAACAG AAAACAGAAC CAGAGTATTC TTTATACGGC GAATCCTACT ACCGGTAAAA CTACAGAACT CTATAAAGAA AGCGATTCTG CCTGGATAGA CATCCGTTCC CGCTGGAATG ATGAACTGGC AGGATGGGAC TGGACCAATG GCGGTAAATC CTTCATATGG GTCAGTGAGA AAGATGGCTG GAGACACCTC TACAGCATCG ATATGAATGG TAAAGAAACC CTGATCACAC CAGGTCAATA TGATATTATC AACCTGCTGC GTATCGACGA AGCGCATAAC CTTGCTTATG TGCTGGCGTC TCCTGACAAT GCAACCCAGC AGTATCTGTA TAGAGTGTCC CTGGATGGTA AAGGTCAGCC GGAAAGAGTT TCTCCGCTGG CCGAATCAGG TACGCATGAA TATGAGATTT CTCCGACTGC GGACTATGCC CTGCACAGTT TCTCTAATCA CTACTATCAG CCACATTCAG AACTGGTATA TCTGCCGGAG CATAAAGATG CGACCAGCAG CCGTATCATC CGTGACTTAC AGACTTCCCG TTTTGCAATC CGCCAGGAAT TCTTCCAGGT GACTACTGCT GATGGTGTGA CCATGGATGG CTGGATGGCC CGTCCGGCTA ATTTCGATTC TACGAAGAAA TACCCGGTGG TATTCTATGT ATACGGCGAA CCGGCAGCTG CTACTGCTAA AGACGAATTT GGCGCAGGAC GCAATTTCAT CTACAATGGC GATATGGCGG CGGACGGTTA TATCTATATT TCTATGGATA ACCGTGGTAC ACCTTTACCG AAAGGCCGTG CCTGGCGTAA AGCGATCTAC CGTAAGGTGG GGCAGGTGAA TATGCAGGAT CAGGCGATGG CTGCAACGGA GCTCTTTAAA CGTCACGCTT ACCTGGACAC CTCCCGCGTA GCGGTATGGG GCTGGAGTGG TGGCGGTGGT ATGACGCTAA ACCTGTTGTT CCGTTATCCG CAGATCTACA AAACAGGTAT TGCTGTTGCA GCGGTAGGTA GTTTGTTTAC TTATGATAAT ATTTACCAGG AGCGTTATAT GGGATTACCA CAGGAAAACC GCGAAGACTA TGTAAAAGGT TCTCCGGTGA CCTACACCAA AGGACTAGTG GGTAATTTGC TCTATATACA CGGTACCGGT GATGATAACG TACATTTCCA GAATGCAGAG TTGCTGCAGA ATGAACTGAT CCGTAATGGC AAGCAATTCC AGTTTATGTC TTATCCTAAC CGTACGCATA GTATCAGTGA AGGAGCAGGT ACTTTCCAGC ACCTTTCTGC ATTATATACC AATTACCTGA AAGAGCATTG TCCTCCGGGA GCGAGATAA
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Protein sequence | MRLRYFSCPG SRVLTFLVCM VAGSASAQPW KHVKWSGDGK TFYQTEDNGG IAAYSAKDGQ STQKIAPALL TPKGQSVLEI EDFSYTPDEK KWLIYTKAQK VWRYKTRGDY WVLDIASGKL VQLGKGLPAS SLMFAKFSPD GQKVAYVSEH NLYVEELATH KIKALTKDGT RRLINGTFDW AYEEEFDCRD GFRWSPDSRA IAYWQIDARK IRDFLMIDNT DSLYSYTVPV EYPKAGESPS ACRVGVVDIT TAKTIWLQVP GDAQQHYITR MEWNPARTGL ILQQLNRKQN QSILYTANPT TGKTTELYKE SDSAWIDIRS RWNDELAGWD WTNGGKSFIW VSEKDGWRHL YSIDMNGKET LITPGQYDII NLLRIDEAHN LAYVLASPDN ATQQYLYRVS LDGKGQPERV SPLAESGTHE YEISPTADYA LHSFSNHYYQ PHSELVYLPE HKDATSSRII RDLQTSRFAI RQEFFQVTTA DGVTMDGWMA RPANFDSTKK YPVVFYVYGE PAAATAKDEF GAGRNFIYNG DMAADGYIYI SMDNRGTPLP KGRAWRKAIY RKVGQVNMQD QAMAATELFK RHAYLDTSRV AVWGWSGGGG MTLNLLFRYP QIYKTGIAVA AVGSLFTYDN IYQERYMGLP QENREDYVKG SPVTYTKGLV GNLLYIHGTG DDNVHFQNAE LLQNELIRNG KQFQFMSYPN RTHSISEGAG TFQHLSALYT NYLKEHCPPG AR
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