Gene Cpin_4026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4026 
Symbol 
ID8360199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5010244 
End bp5011152 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID644966199 
Productribonuclease BN 
Protein accessionYP_003123688 
Protein GI256423035 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.194003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAG AGTATTTCAA GAGCATTATA CGCACACTGC GTGTTTCATT TCAGGTACTA 
CAAAATAATG ACCCGTTGCG ACTGGCGGGA GCGACTGCTT TTTTCGCCAG TTTCGCGCTA
CCACCGATTC TGCTGATCTT ATTGCAGGTA TTTGGTTTGC TTTTCGACCG CCGGTCTATT
GGCCGGCAGC TTATCGGGCG CTTGGGAGAA CTGGTCGGTA AGGACAGCGC CCAACAGGTA
GTGATCACGC TCAGAGGTTT CCGCGGGCTG GCACAAACCT GGCCCATAGC CATTATATTA
TTCGTCTTTC TCTTATTCGT AGCAACCACT TTGTTGAAAG TGATCCGGAG TTCCCTCAAC
CAGGTATGGA TGATACGTAT AGCTGTCAGG GAAAGTTTCC TGGATTCGCT GCTTGGAAGA
TTACGCTCAC TGATCGTTAT CGGTGCTGCC GGTTTGTTGT TCCTGGCCAG CGTCCTGGGT
GAAAGTGCGC ATGCCTTTCT GGGTAATTAT GTCAATGAAT TATTTCCCAG CGCTGCTTTT
ATATTCAGCG GGGTATTTAC ACAGCTGGTC TCCCTGTTGA TCGTTACCTG CTGGTTTGCG
GTACTGTTCC GTTATCTGCC GGATGCCCGG CCGACATGGA AAGTCGCTTT CTCGGGAGCG
CTGCTCACGG GAGTACTTTT TAGTATCGGT AAATTGGTAT TACGCCGTTT ACTGTATGGG
GGTAATATCG GAATCCTGTA TGGGGCTTCA GCCTCCGCTG TGCTGTTGAT GCTGTTTATC
TTCTATAGTG CTATTATCTT CTATTACGGC GCTGCATTTA CTAAAGTCTG GAGCGAGTTT
AAACATCGTC CGATGCAGCC ACTGCGTCAT GCCACGTTCT ATGAACTGGC CGATGTGGAA
GCCCGCTGA
 
Protein sequence
MSREYFKSII RTLRVSFQVL QNNDPLRLAG ATAFFASFAL PPILLILLQV FGLLFDRRSI 
GRQLIGRLGE LVGKDSAQQV VITLRGFRGL AQTWPIAIIL FVFLLFVATT LLKVIRSSLN
QVWMIRIAVR ESFLDSLLGR LRSLIVIGAA GLLFLASVLG ESAHAFLGNY VNELFPSAAF
IFSGVFTQLV SLLIVTCWFA VLFRYLPDAR PTWKVAFSGA LLTGVLFSIG KLVLRRLLYG
GNIGILYGAS ASAVLLMLFI FYSAIIFYYG AAFTKVWSEF KHRPMQPLRH ATFYELADVE
AR