Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4026 |
Symbol | |
ID | 8360199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5010244 |
End bp | 5011152 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644966199 |
Product | ribonuclease BN |
Protein accession | YP_003123688 |
Protein GI | 256423035 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.194003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAG AGTATTTCAA GAGCATTATA CGCACACTGC GTGTTTCATT TCAGGTACTA CAAAATAATG ACCCGTTGCG ACTGGCGGGA GCGACTGCTT TTTTCGCCAG TTTCGCGCTA CCACCGATTC TGCTGATCTT ATTGCAGGTA TTTGGTTTGC TTTTCGACCG CCGGTCTATT GGCCGGCAGC TTATCGGGCG CTTGGGAGAA CTGGTCGGTA AGGACAGCGC CCAACAGGTA GTGATCACGC TCAGAGGTTT CCGCGGGCTG GCACAAACCT GGCCCATAGC CATTATATTA TTCGTCTTTC TCTTATTCGT AGCAACCACT TTGTTGAAAG TGATCCGGAG TTCCCTCAAC CAGGTATGGA TGATACGTAT AGCTGTCAGG GAAAGTTTCC TGGATTCGCT GCTTGGAAGA TTACGCTCAC TGATCGTTAT CGGTGCTGCC GGTTTGTTGT TCCTGGCCAG CGTCCTGGGT GAAAGTGCGC ATGCCTTTCT GGGTAATTAT GTCAATGAAT TATTTCCCAG CGCTGCTTTT ATATTCAGCG GGGTATTTAC ACAGCTGGTC TCCCTGTTGA TCGTTACCTG CTGGTTTGCG GTACTGTTCC GTTATCTGCC GGATGCCCGG CCGACATGGA AAGTCGCTTT CTCGGGAGCG CTGCTCACGG GAGTACTTTT TAGTATCGGT AAATTGGTAT TACGCCGTTT ACTGTATGGG GGTAATATCG GAATCCTGTA TGGGGCTTCA GCCTCCGCTG TGCTGTTGAT GCTGTTTATC TTCTATAGTG CTATTATCTT CTATTACGGC GCTGCATTTA CTAAAGTCTG GAGCGAGTTT AAACATCGTC CGATGCAGCC ACTGCGTCAT GCCACGTTCT ATGAACTGGC CGATGTGGAA GCCCGCTGA
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Protein sequence | MSREYFKSII RTLRVSFQVL QNNDPLRLAG ATAFFASFAL PPILLILLQV FGLLFDRRSI GRQLIGRLGE LVGKDSAQQV VITLRGFRGL AQTWPIAIIL FVFLLFVATT LLKVIRSSLN QVWMIRIAVR ESFLDSLLGR LRSLIVIGAA GLLFLASVLG ESAHAFLGNY VNELFPSAAF IFSGVFTQLV SLLIVTCWFA VLFRYLPDAR PTWKVAFSGA LLTGVLFSIG KLVLRRLLYG GNIGILYGAS ASAVLLMLFI FYSAIIFYYG AAFTKVWSEF KHRPMQPLRH ATFYELADVE AR
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