| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4021 |
|---|
| Symbol | |
|---|
| ID | 8360194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5001489 |
|---|
| End bp | 5002433 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644966194 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_003123683 |
|---|
| Protein GI | 256423030 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.821334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.535863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GACAATTGGG AAAATCGGCA TTACAGGTGG CACCTTTGGC TTTTGGCGGA
AATGTTTTCG GCTGGACAGC AGATGAAGCT ACTTCTTTCT CTTTACTAGA TGCATTTATG
GCGGGAGGCT TTAACCTGAT CGACACGGCA GACTCCTATT CTCATTGGGC GCCTGGCAAC
AGCGGTGGAG AATCAGAAAC GATTATTGGT AAATGGTTAA AGAAAAGCGG CAAACGTGAT
CAGGTGGTCA TTGCCACTAA AGTAGGTGGC GGAAAAGTAA AAGACCTCTC TCCTGCCTAT
ATAGAAAAAA CGGTAGAAGA ATCATTACGC AGATTGCAAA CAGATTATAT CGATCTGTAT
CAGTCGCACT ATGACGATCT TAAAACACCC ATCGACGAAA CACTCGCTAC CTACGACAAA
CTGGTGAAAG CGGGCAAAGT CCGCGTAATA GGCGCCTCCA ACTTCAGTCC TGAAAGACTG
TTACAATCAC TGGAATCCAG CGAAACAAAC GGCTTTCCCC GGTACGAATC CCTACAACCT
GAATATAATC TCTACGACCG CCAGAAATTT GAGCGTGAAT ACCAGCCGAT CACTCAGGGC
TACAATCTTG GCGTTATCAG CTACTATTCC CTCGCCAGCG GTTTCCTGAG CGGCAAATAC
AGAACAAAGG AAGACGCCTC CAAAAGCACC CGTGGTGAAA AAGCCGTAGG CTACCTCGAC
GAACGCGGAC AAAGCATTCT CGAAACCCTC GACGAAGTAT CCGCAGACTT CAAAACCACA
CCCACCAGTG TCGCTATCGC CTGGCTTGTC CAACACCCCG GTATCACAGC TCCCATCGTC
AGCGCCACCA GCACCCAACA ACTGGAAGAC CTCCTGAAGG CCACTCAGCT GGGACTAGAC
GCAGGCGCAT TAGAAAAGCT CAACATCGCC AGCGACTATG AATAG
|
|---|
| Protein sequence | MEKRQLGKSA LQVAPLAFGG NVFGWTADEA TSFSLLDAFM AGGFNLIDTA DSYSHWAPGN
SGGESETIIG KWLKKSGKRD QVVIATKVGG GKVKDLSPAY IEKTVEESLR RLQTDYIDLY
QSHYDDLKTP IDETLATYDK LVKAGKVRVI GASNFSPERL LQSLESSETN GFPRYESLQP
EYNLYDRQKF EREYQPITQG YNLGVISYYS LASGFLSGKY RTKEDASKST RGEKAVGYLD
ERGQSILETL DEVSADFKTT PTSVAIAWLV QHPGITAPIV SATSTQQLED LLKATQLGLD
AGALEKLNIA SDYE
|
|---|
| |