Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4017 |
Symbol | |
ID | 8360190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4997386 |
End bp | 4998258 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966190 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_003123679 |
Protein GI | 256423026 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.193202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.169945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTGT TCTTACTGCT TAGCCTGCAA CTGTCGACGT ACTGTGTCTT TGCTACTGCT GACACAGCTA TTGTGAATGT GAATGCGGAT ACGACTATCC ATCACGCAAA TGATGTGCCA ACAACATCAG AAAAGGTCAT GGAACCTGTT CCGGTTTTTA ATACAAACCT GAACTATAAA CGCAACATTC CCAATTATAC GTCCAGACTT GCCGGCATCA TCGTCCCAAC CGCCATGATT ACTTATGGCG CCGTGTCATT GACCAGCGGC GGCTTACGCT CCCTGGACCG CAGCACCAAG AATGAGATCA TGGAAGATCA TCCGACCTTC CGCACCAGCA TCGATGATTA TCTGAAATAT GTGCCTGCAG CCGCCGTATA TGCACTGAAT ATGGCTGGTA TCAAGGGTAA ACACAATTTC GCAGATCGTA CCATCCTGTT GGGAATGTCG TCCGTTCTGG TGACTTCCTC TACTTTTTTC ATCAAAAATG CTACAGGTCG CCTGCGTCCT GATGGTAGTA CTTACAACTC TTTCCCTTCC GGCCACACTT CTGTCGCGTT CATGACAGCA CAGTTCATGT GGGAGGAATA CAAAGATGTT AGTCCCTGGT ACGGTGTGGC AGGTTATGCT GTCGCCACTA CTACGGGAGT ACTGCGTATC TACAACAACC GTCACTGGTT AAGTGATGTT GTTGCCGGTG CAGGCCTCGG TATCCTCAGC ACAAAAGCAG CTTACTGGGC TTATCCTAAG ATCCAGCGCC TCTTTACGCC AAAGGACCGT GACCGCGAGC CAAATACCCG CGCGATCCTT ATGCCGAACT ACAACACACA ATGGAAATCC GTAGGACTTT CCGCTGTGCT GCTGATGAAG TAA
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Protein sequence | MRLFLLLSLQ LSTYCVFATA DTAIVNVNAD TTIHHANDVP TTSEKVMEPV PVFNTNLNYK RNIPNYTSRL AGIIVPTAMI TYGAVSLTSG GLRSLDRSTK NEIMEDHPTF RTSIDDYLKY VPAAAVYALN MAGIKGKHNF ADRTILLGMS SVLVTSSTFF IKNATGRLRP DGSTYNSFPS GHTSVAFMTA QFMWEEYKDV SPWYGVAGYA VATTTGVLRI YNNRHWLSDV VAGAGLGILS TKAAYWAYPK IQRLFTPKDR DREPNTRAIL MPNYNTQWKS VGLSAVLLMK
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