Gene Cpin_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4017 
Symbol 
ID8360190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4997386 
End bp4998258 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content49% 
IMG OID644966190 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003123679 
Protein GI256423026 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.193202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.169945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGT TCTTACTGCT TAGCCTGCAA CTGTCGACGT ACTGTGTCTT TGCTACTGCT 
GACACAGCTA TTGTGAATGT GAATGCGGAT ACGACTATCC ATCACGCAAA TGATGTGCCA
ACAACATCAG AAAAGGTCAT GGAACCTGTT CCGGTTTTTA ATACAAACCT GAACTATAAA
CGCAACATTC CCAATTATAC GTCCAGACTT GCCGGCATCA TCGTCCCAAC CGCCATGATT
ACTTATGGCG CCGTGTCATT GACCAGCGGC GGCTTACGCT CCCTGGACCG CAGCACCAAG
AATGAGATCA TGGAAGATCA TCCGACCTTC CGCACCAGCA TCGATGATTA TCTGAAATAT
GTGCCTGCAG CCGCCGTATA TGCACTGAAT ATGGCTGGTA TCAAGGGTAA ACACAATTTC
GCAGATCGTA CCATCCTGTT GGGAATGTCG TCCGTTCTGG TGACTTCCTC TACTTTTTTC
ATCAAAAATG CTACAGGTCG CCTGCGTCCT GATGGTAGTA CTTACAACTC TTTCCCTTCC
GGCCACACTT CTGTCGCGTT CATGACAGCA CAGTTCATGT GGGAGGAATA CAAAGATGTT
AGTCCCTGGT ACGGTGTGGC AGGTTATGCT GTCGCCACTA CTACGGGAGT ACTGCGTATC
TACAACAACC GTCACTGGTT AAGTGATGTT GTTGCCGGTG CAGGCCTCGG TATCCTCAGC
ACAAAAGCAG CTTACTGGGC TTATCCTAAG ATCCAGCGCC TCTTTACGCC AAAGGACCGT
GACCGCGAGC CAAATACCCG CGCGATCCTT ATGCCGAACT ACAACACACA ATGGAAATCC
GTAGGACTTT CCGCTGTGCT GCTGATGAAG TAA
 
Protein sequence
MRLFLLLSLQ LSTYCVFATA DTAIVNVNAD TTIHHANDVP TTSEKVMEPV PVFNTNLNYK 
RNIPNYTSRL AGIIVPTAMI TYGAVSLTSG GLRSLDRSTK NEIMEDHPTF RTSIDDYLKY
VPAAAVYALN MAGIKGKHNF ADRTILLGMS SVLVTSSTFF IKNATGRLRP DGSTYNSFPS
GHTSVAFMTA QFMWEEYKDV SPWYGVAGYA VATTTGVLRI YNNRHWLSDV VAGAGLGILS
TKAAYWAYPK IQRLFTPKDR DREPNTRAIL MPNYNTQWKS VGLSAVLLMK