| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4001 |
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| Symbol | |
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| ID | 8360174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4978818 |
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| End bp | 4981433 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966175 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_003123664 |
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| Protein GI | 256423011 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00358215 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0224301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA ACAACTTCAC TATTAAATCG CAGGAAATAC TGCAACAAGC GCAGCAACTG
GCCTTCAATG GACAACAACA GGCCATTGAG ACAGGGCACT TGCTGAAGGC CCTGCTGGAA
GACCAGGACA GTGCTATCGA CTATTTACTT AAAAAGAACA ATATAAATGT CAACTTCCTG
TCTTCCAGAC TGGAAGATCA AATAAAGAAA TACCCCCGTA TTTCCGGCGG GGAAGCCGGG
CAGGTATTAG GCCGCGATGC GAATAACGCC ATGCTCAGAG CTGGCTCCAG CATCAAGGAG
TTTAAAGACG AATTTGTGAG TGTCGAACAC CTGTTACTAG GTATACTGGG TGGCAGTGAC
GACACTGCCA AATTGCTGAA AGATGCAGGT TTGACAGAAA AAGGTCTGAA GGCTGCTATC
AAAGATCTGC GTAAGGGTAG TACCGTCAAT TCTCAAACTG CTGATACCCA ATATAATTCC
CTTCAGAAGT ATGCAAAGAA CCTGAATGAA CTGGCACGTG CCGGTAAACT GGATCCTGTC
ATCGGTCGTG ATGAAGAGAT CCGCAGGACC CTGCATATCC TTTCCCGCCG TTCCAAAAAT
AACCCTATCC TGGTCGGAGA ACCTGGTGTA GGTAAGACAG CGATCGTGGA AGGGTTGGCG
CATCGTATCA TCAACGGAGA CGTGCCTGAG AACCTGCGTT CCAAGATCAT TTATGCCCTT
GATATGGGTG CATTGATGGC TGGCGCTAAA TACAGAGGGG AATTCGAAGA AAGACTGAAA
TCAGTGATTA AAGAGGTGAC GGAAAGCAAC GGGGAACTGG TGCTCTTTAT AGACGAGATT
CATACCCTTG TAGGCGCTGG CGCTATGGAA GGCGCGATGG ACGCTGCCAA CATTCTGAAA
CCGGCCCTGG CCCGTGGTGA ATTACGTGCC ATCGGCGCCA CCACACTGAC AGAATACCAG
AAATATTTTG AGAAAGATAA AGCCCTGGAA CGCCGTTTCC AGAAAGTGAT GGTAGACGAG
CCAAACGTGG AAGATGCCAT ATCTATCCTC CGTGGTCTGA AAGAGCGTTA CGAAAGCCAT
CACCATGTGC TGATCAAAGA CGAAGCGATC ATTGCGGCGG TTGAATTATC GCACCGCTAT
ATTACGGATC GTTTCCTGCC GGATAAAGCG ATTGACCTGA TTGATGAAAG TGCAGCCAAA
CTCCGCCTGG AGATGAACTC CATGCCGGAG GAACTGGACG AACTGGAACG TCGTATCAGA
CAACTGGAAA TTGAAAGAGA AGCGATCAAA CGTGAGAATG ATGAAGACAA GCTGCGTGAG
CTGAACGGGG AGATTGCCCG TCTGGGAGAA CAGCGCAGCA CTTTCAAAGC AAAATGGCAG
GAGGAAAAAG AGATCGTAGA TAAACTGCAG GCTGCTAAAG GCGATATTGA AAATCTGAAG
CTGGAAGCAG AACAGGCAGA ACGTAACGGG GAATACGGCC GTGTAGCCGA GATCCGTTAT
GGTAAGGTAA AAGAACAGGA AGAACTGATT GCAAAATATA CAGCGGAGCT GAATGAAATG
TCGACAGACC ATAAGCGTTT GTTGAAAGAA GAGGTAGACG CAGAAGATAT TGCGGAAAAC
GTTGCCAAAG CGACAGGTAT TCCGGTATCG AGGATGTTGC AGAGTGAAAG AGACAAACTG
CTCAACCTGG AAGAAGAATT GCACAAACGT GTGGTTGGTC AGGAAGAAGC GATCGTCGCT
GTATCTGATG CGATCCGCAG AAGCAGGGCA GGATTACAGG ATCCTAAACG TCCGATAGGT
TCGTTTATCT TCCTGGGTAC CACCGGCGTC GGTAAAACCG AACTGGCAAA AGCCCTGGCA
GAGTACCTGT TTGACGACGA CTCCATGATG ACGCGCATCG ACATGAGCGA ATACCAGGAG
AAACACGCCG TGAGCCGTCT GGTAGGTGCC CCTCCGGGAT ATGTGGGATA TGATGAAGGC
GGACAGCTGA CAGAAGCCGT AAGACGTAAA CCTTATTCTG TCGTGCTGCT GGATGAAATA
GAAAAGGCGC ATCCGGATAC TTTTAACATT TTGTTACAGG TATTAGATGA TGGTCGTCTG
ACAGATAATA AGGGTCGTGT GGTGAACTTT AAAAACACCA TTATCATCAT GACCAGCAAC
ATGGGTAGCC AGATTATCCA GGAGAATTTC GAAAGGATTG ACGAGAGCAA CCGTGAGGAC
GTAGTAGATG CTACCAAAGC AGAGGTAATG AACTTACTGA AACAGACTAT CCGTCCGGAG
TTCCTGAACC GTGTGGACGA GGTGATTATG TTCCAGCCAT TGCTTCGCGA AGAAATTAAG
GGAATAATTA ACATTCAGTT ACAACAGTTA AAGGACCTGG TAGCGCAAAA TGGCATGATA
TTGGAATTCT CTGACTATGC GCTCGACTAC CTGGCCGTTC AGGGTTATGA CCCTCAATTC
GGCGCAAGAC CACTGAAAAG GTTGATACAG AAAGAGATCA TCAATCTGCT GAGTAAAAAG
ATACTTGCAG GGGATATCGA TAAGACTAAG CCGGTGCTGA TTGACGTGTT TGACGGAGTA
GTAGTCATCA GGAACAATCA CACAATAGGC GCATAA
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| Protein sequence | MNLNNFTIKS QEILQQAQQL AFNGQQQAIE TGHLLKALLE DQDSAIDYLL KKNNINVNFL
SSRLEDQIKK YPRISGGEAG QVLGRDANNA MLRAGSSIKE FKDEFVSVEH LLLGILGGSD
DTAKLLKDAG LTEKGLKAAI KDLRKGSTVN SQTADTQYNS LQKYAKNLNE LARAGKLDPV
IGRDEEIRRT LHILSRRSKN NPILVGEPGV GKTAIVEGLA HRIINGDVPE NLRSKIIYAL
DMGALMAGAK YRGEFEERLK SVIKEVTESN GELVLFIDEI HTLVGAGAME GAMDAANILK
PALARGELRA IGATTLTEYQ KYFEKDKALE RRFQKVMVDE PNVEDAISIL RGLKERYESH
HHVLIKDEAI IAAVELSHRY ITDRFLPDKA IDLIDESAAK LRLEMNSMPE ELDELERRIR
QLEIEREAIK RENDEDKLRE LNGEIARLGE QRSTFKAKWQ EEKEIVDKLQ AAKGDIENLK
LEAEQAERNG EYGRVAEIRY GKVKEQEELI AKYTAELNEM STDHKRLLKE EVDAEDIAEN
VAKATGIPVS RMLQSERDKL LNLEEELHKR VVGQEEAIVA VSDAIRRSRA GLQDPKRPIG
SFIFLGTTGV GKTELAKALA EYLFDDDSMM TRIDMSEYQE KHAVSRLVGA PPGYVGYDEG
GQLTEAVRRK PYSVVLLDEI EKAHPDTFNI LLQVLDDGRL TDNKGRVVNF KNTIIIMTSN
MGSQIIQENF ERIDESNRED VVDATKAEVM NLLKQTIRPE FLNRVDEVIM FQPLLREEIK
GIINIQLQQL KDLVAQNGMI LEFSDYALDY LAVQGYDPQF GARPLKRLIQ KEIINLLSKK
ILAGDIDKTK PVLIDVFDGV VVIRNNHTIG A
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