Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3994 |
Symbol | |
ID | 8360167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4968379 |
End bp | 4970022 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644966168 |
Product | ribulokinase |
Protein accession | YP_003123657 |
Protein GI | 256423004 |
COG category | [C] Energy production and conversion |
COG ID | [COG1069] Ribulose kinase |
TIGRFAM ID | [TIGR01234] L-ribulokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.026407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.515054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATT CATTTGTAAT AGGTGTCGAC TTCGGTACCG ATTCAGTGCG CTCTCTCGTA GTAAATACTC AGACAGGACA GGAAGCCGGC AGTGCAGTGC ATTACTACCC TCGCTGGCAG AAAGGATTAT ACTGTGACCC GGCTACGCAA CAATACAGGC AGCACCCGCT GGATTACCTG GAAGGGCTGG AGCATAGTAT CCGTGAAGCA TTGCAGCAAT GTCCTCCGGG TACGGCGGCC CTGGTGAAAG GGATCGCCGT AGACACGACC GGTTCTACGC CGGGTCCGGT AGATGAAACC GGTACGCCGC TGGCTTTGGT ACCCGGATTT GAAGAGAATC CAAATGCCAT GTTCGTCCTC TGGAAAGATC ATACTGCCAA TAAGGAAGCA GCCCTGATTA ATGACATCGC GCATAGCAAT GGGATGGATT ATACCCAGTA CAGTGGCGGT ATTTACAGCA GCGAGTGGTA TTGGGCCAAG ATATTGCACG TTATTACAAC TGATGATGCC GTACGTGAAA AGGCAGCTTC CTGGGTAGAG CATTGCGACT GGATCCCGGC TGTACTCACC GGCAATAAAA GCCTCAGCAC CCTGTTACGC AGTCGTTGCG CAGCGGGTCA TAAAGCGATG TGGCACGCCT CCTGGGGGGG CTTACCTCCG CGTACGTTTC TTGAAAAACT GAATCCCGCA CTCACAAAAT ACGACCAGAC ATATACCGAT ACCGTTGAAG CGACCGTACC TGCCGGCACT ATCAGTGCGG CATGGGCGGA GAAATTGGGT CTGCCAACAG ATGTAATCAT CGGCACCGGT GCATTTGACG CACACATGGG CGCCGTAGGC GGTGGTATCC AGTCTTACTC CCTCTGTAAA GTCATCGGTA CCAGCACCTG CGATATCCTG GTAGCGCCTA TGGAGGAAGC TGGGCATCTG TTTGTAAAAG GTATCTGCGG ACAGGTAGAT GGTTCGGTAA TACCGGGTAT GCTCGGATTG GAAGCGGGTC AATCCGCTTA CGGCGATGTA TTTGCCTGGC TGCGTAAACT GATCATGGGA CCGATGTATG CCCTCTTACC GGATGAGCAG GACAAACTGG CCGCAGTAGA GGGCCGGTTG TTAGGCTACC TCTCGGCACA GGCGCAGCAA TTGCCATTGA AAGAGAATGA TCCGCTGGCA CTGGACTGGT TTAATGGTCG TCGTACGCCA GACGCTAATC ACACGCTGAA AAGCACCATT ACAGGTTTAC ACCTTGGTAT AGACGCTGTA CAGGTGTTCA AAGCACTGGT AGAAGCCACC GCTTTCGGGG CGCAAAGCAT CGCAGCGCGT TTCGAGAAAG AAGGTATCGC GATCAAAGAA GTGATCGCCC TGGGTGGCGT AGCCAAGAAA TCAGGTTATG CCATGCAGGT ACTGGCAGAT GTCATGAACC GTCCTATCCG CATTGTCAAT AGTGAGAATG CATGTGCACT GGGCGCGGCT ATGTTTGCAG CAGTAGCAGC AGGTGTATAT CCTGATATTG ATCAGGCACA GCAGGCAATG ACTTCCGGAT TTGAAACGAC CTGGCAGCCC CGCCAGGAGA ATGTGGCTTA TTACGCCGCC CGTTACCGCA AATTCCAGGA ACTGGGCGCT ATCACCGAAA AACTATACGT ATGA
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Protein sequence | MENSFVIGVD FGTDSVRSLV VNTQTGQEAG SAVHYYPRWQ KGLYCDPATQ QYRQHPLDYL EGLEHSIREA LQQCPPGTAA LVKGIAVDTT GSTPGPVDET GTPLALVPGF EENPNAMFVL WKDHTANKEA ALINDIAHSN GMDYTQYSGG IYSSEWYWAK ILHVITTDDA VREKAASWVE HCDWIPAVLT GNKSLSTLLR SRCAAGHKAM WHASWGGLPP RTFLEKLNPA LTKYDQTYTD TVEATVPAGT ISAAWAEKLG LPTDVIIGTG AFDAHMGAVG GGIQSYSLCK VIGTSTCDIL VAPMEEAGHL FVKGICGQVD GSVIPGMLGL EAGQSAYGDV FAWLRKLIMG PMYALLPDEQ DKLAAVEGRL LGYLSAQAQQ LPLKENDPLA LDWFNGRRTP DANHTLKSTI TGLHLGIDAV QVFKALVEAT AFGAQSIAAR FEKEGIAIKE VIALGGVAKK SGYAMQVLAD VMNRPIRIVN SENACALGAA MFAAVAAGVY PDIDQAQQAM TSGFETTWQP RQENVAYYAA RYRKFQELGA ITEKLYV
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