Gene Cpin_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3991 
Symbol 
ID8360164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4965597 
End bp4966352 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content49% 
IMG OID644966165 
Producthypothetical protein 
Protein accessionYP_003123654 
Protein GI256423001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.228865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC AACAATCCAT TATCACCTTT ACCGGTAAAC TCGGTCCGCA GATCGGCTAT 
GAGCGCAACG GTAAATATTT CCTCCGTGGC GCACCGCAAA TAGTACGTCA GACGATCGCT
ACCCGCAAAG CAGCCAAACG CTTTGGCATA GCCAGCAGAA AAAGCCGGCT TATCCGCAAT
GCCTGCTATC ATGAACTGGA CGTACGCTGC GACAGCAGCC ATGTAAATCG ACTCAATAGC
TTACTGATTG CTGCTAACGG CGATAACGCT GCTATTAATG GTTTCCGCTT TAACCAGCAG
ATCGGCATAG ATCGTTTCCT CCCAGTAAAA CCCACGCTTT CCGGGAATGA TGAACTGTAT
ATTCCCGCAC AGGAAATACC CCCATACGGA CGCTTTAGCG CCCTGGAAAT AAAAGCCATC
GCCGTTCGGA TTGATTTTGA TACACGCCGT GTAACTGGCA CTGATACCGT CGTTACAACC
ATATACCCAG GGAAACCTTT CGAAGGATTG ACCATTCCCC TGTTCGTTGC CGGAGAAGGA
ACGCTGATCC TGACCTTACA AGTGAGAGGA ATGCGCCAGG ATGGTCCGTC CCGTGATCAA
CGATATGTTG CCGCAGATGT CATTGCCGTG ATACCTCCTG AAGCGATAAA ACGCTTTAAA
GTACACACGC ATATCCAACG AGCAACAACA CATCTGTACA ACACACCTCT TCCGGTACAT
ACATACCGCT ATCCTGCTAT CACACAGTTA GAATAA
 
Protein sequence
MAKQQSIITF TGKLGPQIGY ERNGKYFLRG APQIVRQTIA TRKAAKRFGI ASRKSRLIRN 
ACYHELDVRC DSSHVNRLNS LLIAANGDNA AINGFRFNQQ IGIDRFLPVK PTLSGNDELY
IPAQEIPPYG RFSALEIKAI AVRIDFDTRR VTGTDTVVTT IYPGKPFEGL TIPLFVAGEG
TLILTLQVRG MRQDGPSRDQ RYVAADVIAV IPPEAIKRFK VHTHIQRATT HLYNTPLPVH
TYRYPAITQL E