Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3991 |
Symbol | |
ID | 8360164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4965597 |
End bp | 4966352 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966165 |
Product | hypothetical protein |
Protein accession | YP_003123654 |
Protein GI | 256423001 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.228865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC AACAATCCAT TATCACCTTT ACCGGTAAAC TCGGTCCGCA GATCGGCTAT GAGCGCAACG GTAAATATTT CCTCCGTGGC GCACCGCAAA TAGTACGTCA GACGATCGCT ACCCGCAAAG CAGCCAAACG CTTTGGCATA GCCAGCAGAA AAAGCCGGCT TATCCGCAAT GCCTGCTATC ATGAACTGGA CGTACGCTGC GACAGCAGCC ATGTAAATCG ACTCAATAGC TTACTGATTG CTGCTAACGG CGATAACGCT GCTATTAATG GTTTCCGCTT TAACCAGCAG ATCGGCATAG ATCGTTTCCT CCCAGTAAAA CCCACGCTTT CCGGGAATGA TGAACTGTAT ATTCCCGCAC AGGAAATACC CCCATACGGA CGCTTTAGCG CCCTGGAAAT AAAAGCCATC GCCGTTCGGA TTGATTTTGA TACACGCCGT GTAACTGGCA CTGATACCGT CGTTACAACC ATATACCCAG GGAAACCTTT CGAAGGATTG ACCATTCCCC TGTTCGTTGC CGGAGAAGGA ACGCTGATCC TGACCTTACA AGTGAGAGGA ATGCGCCAGG ATGGTCCGTC CCGTGATCAA CGATATGTTG CCGCAGATGT CATTGCCGTG ATACCTCCTG AAGCGATAAA ACGCTTTAAA GTACACACGC ATATCCAACG AGCAACAACA CATCTGTACA ACACACCTCT TCCGGTACAT ACATACCGCT ATCCTGCTAT CACACAGTTA GAATAA
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Protein sequence | MAKQQSIITF TGKLGPQIGY ERNGKYFLRG APQIVRQTIA TRKAAKRFGI ASRKSRLIRN ACYHELDVRC DSSHVNRLNS LLIAANGDNA AINGFRFNQQ IGIDRFLPVK PTLSGNDELY IPAQEIPPYG RFSALEIKAI AVRIDFDTRR VTGTDTVVTT IYPGKPFEGL TIPLFVAGEG TLILTLQVRG MRQDGPSRDQ RYVAADVIAV IPPEAIKRFK VHTHIQRATT HLYNTPLPVH TYRYPAITQL E
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