| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3981 |
|---|
| Symbol | |
|---|
| ID | 8360154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4951329 |
|---|
| End bp | 4954373 |
|---|
| Gene Length | 3045 bp |
|---|
| Protein Length | 1014 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644966155 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_003123644 |
|---|
| Protein GI | 256422991 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CTTCATACGC GGTAAAGAAC TACCAGTTTA CACTGGTCAT CTTTATCATG
ATTATTGTAT TAGGTCTGAC GACCATCCTA TCCATGCCCC GCTCAGAGGA TCCGGAGGTA
AAATCTCCCA TATTCAGCGT AGTGGTGGTA TACCCTGGTA CCAGTCCGAA AGACATGGAA
GACCTGGTGG TAGACCCGCT GGAAAAAGAA CTCTCCTCCC AGGAAAACAT CAAACGTGTA
CGTACCAATA TCGGCGACGG TCTGGCCGTT ATCCGCGTAG AATATAAATA CAACAGTAAC
GTAGACGATA AATACCAGGA AGTACTGCGC GTCGTAAATG GTAAACGCGG TGAACTACCC
GATAATATCA ATATCGACGT ACAACGTTTA CAACCCAGTG ATGTAAACAT CATGCAGATC
GCCCTCGTAT CGGAAACTGC TCCCAAAGAC AAAATCCAGT ACTACGCCGA AAAACTGCAG
GACGACCTGG AGAATATAAA AGCGCTGAAG AACGTAGAGA TCCACGGTAT TCCCAACAGA
CAGGTAAAAA TAGAACTGAA CCTGGAAAAG ATCGCCCAAC TCGGATTGCC GGTTAATAAA
GTGATCTCCA GCATCCAGAA TGAAATGGCC AACATCCCCG GCGGTAGCGT AGACGCCGGC
AACCGTAGCT ATAACATCAA AAGCAGTGGC AGTTATCAGC AACTGGAAGA AATCAAAAAC
ACCGTTGTAT TCAACAGCAA GGGAAAGAAC ATCTTCCTGA GAGACGTTTC CAATATCTAT
TACGGCTTCG CCGATGAACA ATACGAAACA AGATTGAACG GCCGCCGTTG TGCCTTCGTA
GTAGCTGCAC AGAAAGAAGG CGAAAATATC ACGCAGACGA AGAAATTATA CGCACCCGTA
CTGACCGCTT TCAAGAAAAC CCTTCCTTCC AATATCGATA TGATACAGCA TTTCGATCAG
GCAGATGCGG TAAACAGACG TCTCGGCGGA CTCGGAAAAG ACTTCATCAT TGCAATCCTC
CTGGTAGCGA TTACATTGCT CCCACTGGGT TTCCGTCCTG CATTGATTGT GATGATCTCT
ATTCCCCTGT CCCTCGCTAT CGGTGTGGTA TTACTGAACG TATTCGGGTA TAACCTGAAT
CAGTTGAGTA TCGTCGGACT GGTAGTAGCC CTCGGTTTGC TTGTGGATGA TAGTATCGTA
GTCGTGGAAA ACATCGAACG CTGGATACTC GAAGGGCATA CAAAAATGGA AGCTACCTTA
AAAGCTACCA AACAGATCGG ACAGGCCGTA GTCGGTTGTA CAGCCGCACT CATGATTGCC
TTTATGCCAC TGGTATTCCT CCCGGAAGGC GCTGGTGACT TTATACGTGG TTTACCCATG
GCCGTTATCC TGAGCGTATT TGCCTCTATG CTCGTATCAC TCACCATCAT TCCGTTCCTG
TCCAGCAAAT TGCTGTCAGA ACACACCGGT CACCCGGATG GTAACATCTT CATGCGTACG
CTGAAGAAAC TCATCCACGG CAGTTACTCC CGCTTACTGG ATAAAGCTCT GAACAGACCC
GTGATCACTA TTGTCGTGAC CGTACTGATC TTTGGCGCAT CCATGTTTAT CTTCCAGATT
GTAGGTTTCA GCCTCTTCCC GGCTTCAGAA AAACCACAGT TCCTGATCAA CATCACCACA
CCGCCGCAAT CCAGTCTCGA ATACACAAAA AGTATCGCCA GACAGGTAGA ACAGGAACTG
AAGAATGAAA AAGCGATTCA ATACTTCGCC TCTAACGTAG GTAAAGGTAA CCCACGTGTT
TACTATAACG TCATACAGGA ACACGAACGT ACCGACTACG CACAGATCTT CGTACAGCTG
GACGAACACA CCGCACCTGA TAAAAAGCTG AAACTGATCG ACAGACTGCG TAAACGCTGG
ACGCCATATC CCGGTGCAAA AGTAGAAGTG ATCAACTTCG AACAGGGACC ACCGGCGCCG
GCACCTGTAG AAGTACGTTT GTTCGGAGAC AACCTGGATA CCCTCCGCAG TCTGGCCGCC
CAGGTAGAGA TCATGCTGCA GAAAGTGCCA GGCGCTATCT ATGTAAACAA TCCGGTAAAA
CTGCTGAAAA CAGATATACG TGTAGATATC GATAAAGAGA AAGCGCAATT ACTGGGCATT
CCAAGTGTGA ATATTGACCG TACGGTACGT CTGGCAGTTG CAGGACTTAA CCTCGGTCAT
TATGCCGACA AGAACGATAA TGATTACGAC GTCCTGCTGA CACGTAATAA AGATGGCCGC
CCGACCATGG AAGTCTTCAA CAACCTCTAT GTAAACAACC AGGATGACAA ACCTTATCCG
TTGTCACAGG TAGCAGGTCT GAAAATGGAG GCGTCCCCCC TGCATATCAA TCATCAGGAA
AAAAGACGCG TGGTATCTGT GACCGCTTCT TTACAGGAAG GTTTCCTGGC AGACCGTGTT
ATCAGTAGCA CCATCGAAAA GATGAACTCC ATCCACCTGC CAGCTGGTTA CAGCTATGAA
ATGGGTGGCG AGGTAGAAGC CCGTCAGGAT TCATTCGGCG GTTTCCTCAG CATCATTATA
GTGACCATTT TCCTCTTCGT AGCGGTACTG GTACTGGAGT TTAAAACTTT CAAAAGTACC
CTGATCGTAT TATCTGTTAT TCCGCTGGGT GTAGTAGGCG CGGCCGTTGC TTTATGGGTA
ACCGGCAATT CCCTGTCATT CGTAGCAATT ATTGGTATGA TTGCCCTTGC GGGAATTGAG
GTAAAGAATA CAATCCTCCT GGTAGACTTT ACAAACCAGT TGAGAGAAGA AGGTAAATCG
CTGGAAGACG CAATCAGAGA AGCGGGTGAG ATCCGCTTCC TCCCGATTGT GCTCACATCC
CTGACCGCCA TCGGTGGTCT GATGCCGATA GCAGTCTCCA CCAATCCATT GATAGCTCCT
TTGGCCATTG TATTGATCGG AGGACTGATC AGTTCTACCC TCCTGTCGAG GATTGTGACA
CCGGTGGTAT ACAAACTTAT GCCACCTAAA ACAGCTAACC AATAA
|
|---|
| Protein sequence | MKISSYAVKN YQFTLVIFIM IIVLGLTTIL SMPRSEDPEV KSPIFSVVVV YPGTSPKDME
DLVVDPLEKE LSSQENIKRV RTNIGDGLAV IRVEYKYNSN VDDKYQEVLR VVNGKRGELP
DNINIDVQRL QPSDVNIMQI ALVSETAPKD KIQYYAEKLQ DDLENIKALK NVEIHGIPNR
QVKIELNLEK IAQLGLPVNK VISSIQNEMA NIPGGSVDAG NRSYNIKSSG SYQQLEEIKN
TVVFNSKGKN IFLRDVSNIY YGFADEQYET RLNGRRCAFV VAAQKEGENI TQTKKLYAPV
LTAFKKTLPS NIDMIQHFDQ ADAVNRRLGG LGKDFIIAIL LVAITLLPLG FRPALIVMIS
IPLSLAIGVV LLNVFGYNLN QLSIVGLVVA LGLLVDDSIV VVENIERWIL EGHTKMEATL
KATKQIGQAV VGCTAALMIA FMPLVFLPEG AGDFIRGLPM AVILSVFASM LVSLTIIPFL
SSKLLSEHTG HPDGNIFMRT LKKLIHGSYS RLLDKALNRP VITIVVTVLI FGASMFIFQI
VGFSLFPASE KPQFLINITT PPQSSLEYTK SIARQVEQEL KNEKAIQYFA SNVGKGNPRV
YYNVIQEHER TDYAQIFVQL DEHTAPDKKL KLIDRLRKRW TPYPGAKVEV INFEQGPPAP
APVEVRLFGD NLDTLRSLAA QVEIMLQKVP GAIYVNNPVK LLKTDIRVDI DKEKAQLLGI
PSVNIDRTVR LAVAGLNLGH YADKNDNDYD VLLTRNKDGR PTMEVFNNLY VNNQDDKPYP
LSQVAGLKME ASPLHINHQE KRRVVSVTAS LQEGFLADRV ISSTIEKMNS IHLPAGYSYE
MGGEVEARQD SFGGFLSIII VTIFLFVAVL VLEFKTFKST LIVLSVIPLG VVGAAVALWV
TGNSLSFVAI IGMIALAGIE VKNTILLVDF TNQLREEGKS LEDAIREAGE IRFLPIVLTS
LTAIGGLMPI AVSTNPLIAP LAIVLIGGLI SSTLLSRIVT PVVYKLMPPK TANQ
|
|---|
| |