| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3977 |
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| Symbol | |
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| ID | 8360150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4945900 |
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| End bp | 4947060 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966151 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003123640 |
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| Protein GI | 256422987 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.128931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.658799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA ATCATGAACA CATATACCAG TTGTTATTGC AAAAGCGCAA CGGTACAATC
AATGAATCAG ACGATCAGTA TGTAACAGCA TTAATCAGCG GCCACGAAGA CGTCGAATTA
ATGTGGAGGG CCCTGAAGCA TAGTTTCTCG CTGCCCGGTG AGGAAAAATT CTGGCAGCAG
ATCGATGTAT CGAATGCCTG GAGTGCTGTC AGGGAAGAAT TATCCGTAAA GAACACGAAT
ATACGCAGTA TCAGAAAGTG GCTGTTTGCG GCGGCTGTTG TAACCGTCGC CATGACGGGT
ATCAGTCTGA TATGGAAGAA TACTCGCCAG CAGCCATTTG AGGCGGCTGG TCCGGCGCCT
GTCACTAAGC CCGCTGCGCC CAAGGGCGGT TTGCAGTTGC AGCTGGCCGG AGGAGAGACT
ATTGCCCTAC CTTATAATCA GGCAGGACAG GATATCAAGG CCGGAGATGT GCAGCTGAGT
GCCGGGGCCA AGAAATTACA GTATACCAGC GGTACGGGTA TGGGTAGTGG CTATAATACG
CTGACAGTTC CGCCTAAAAT GGACTATAAA CTGGTGCTTT CAGATGGCAC GGAGGTATGG
CTGAATGCTA CTTCCCGTTT ACGTTTTCCA TTCAATTTTA CAGGAGACAA ACGTGAGGTC
TACCTGGATG GGGAAGCGTA TTTCCAGGTT ACTAAAAATG ATGCTAAACC ATTTGTCGTA
CATACAGAGA ATACGGATAT TCAGGTACTG GGTACCAGTT TCAATGTCAA TGCCTATAGT
GATGGTCTGA CCCGTACTTC ACTGGTCAGC GGTGCCGTAA TCAGCAGGGC TGAAGGCAAA
GAAGTACAGC TGAAGCCTGG TCAGGAAGCC GTTTATAGCA GCGAAAAGGG CTATAAAGTG
ACTGATTTTG ACGACAGTGA AGTGCTGGCC TGGATGAAAG GCGTGTATGT ATTTCATAAT
ACTTCCCTGT CAGAAATTGC CAGCGTCATT GAACGTTGGT ATGGCGTCCA GGTAGTATTT
GACAATAAGG AACTGGCCAG TAAGAAATTT ACCGGTGGAT TAGAGAAACT GCAACGTCTC
GATTATTTCC TGGAAACCCT GGAACTGATC GGCGACATCC ATCATACTTA TGATGCGAAT
GGTGTATTAC ACCTGAAATA A
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| Protein sequence | MSENHEHIYQ LLLQKRNGTI NESDDQYVTA LISGHEDVEL MWRALKHSFS LPGEEKFWQQ
IDVSNAWSAV REELSVKNTN IRSIRKWLFA AAVVTVAMTG ISLIWKNTRQ QPFEAAGPAP
VTKPAAPKGG LQLQLAGGET IALPYNQAGQ DIKAGDVQLS AGAKKLQYTS GTGMGSGYNT
LTVPPKMDYK LVLSDGTEVW LNATSRLRFP FNFTGDKREV YLDGEAYFQV TKNDAKPFVV
HTENTDIQVL GTSFNVNAYS DGLTRTSLVS GAVISRAEGK EVQLKPGQEA VYSSEKGYKV
TDFDDSEVLA WMKGVYVFHN TSLSEIASVI ERWYGVQVVF DNKELASKKF TGGLEKLQRL
DYFLETLELI GDIHHTYDAN GVLHLK
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