Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3976 |
Symbol | |
ID | 8360149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4943221 |
End bp | 4945506 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966150 |
Product | alpha-1,2-mannosidase |
Protein accession | YP_003123639 |
Protein GI | 256422986 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00516105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.689396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGG GACTTAAGCA TTACCCTGTG CTGGCTGCCT CACTTCTACT GGCCGGCATG CAGGTAAACG GACAAGACAA AAAACCAACT TTTACTTCAG GAAAGGAGTT TAAGCCATCA GAATACGTAA ATCCATACAT CGGTACCGGT GGACATGGTC ACGTGTTCCT GGGCGCGAGC GTACCTTTTG GTGCAGTACA GGTGGGACCT ACCAACATTG TAAAGGGTTG GGACTGGTGT TCTGGTTATC ATTATTCTGA CAGTGTGGTG ATTGGTTTCC CGCAGATGCA CCTGAGTGGT ACCGGTATCG GCGACCTGGG CGATGTGCTG ATTATGCCCT ATACCGGTAA GATCAGGACC AACCACGGTT CACAGGAGAA TCCGACCAGC GGTTACGGAT CCCACTATAC ACACGCGCAT GAAACAGCTA AACCTGGTTA TTACGCGGTG CAGCTGGAAG ACTACAATAT CAAAGTGGAA CTGACTGCTT CTGAAAGGGT TGGTTTCCAT AAATATACAT TCCCGGCAGG CCAGGAAGGT CACATTATCA TCGACCTGAA AGAAGGTATC GGCTGGGATG CGCCTGTAGA AACCTTCATC CAGAAGAAGG ACGAGTATAC CCTGGTAGGT TACCGTTATT CCAAAGGATG GGCGGAAGAT CAGCGCCTGT GGTTTGCGAT TAAGAGCAAT GTACCTGTAA AGGACTTTGT AGTATTTGAC GGTGACAAAC AACTCTCTGG TACTGAAGGA AAAGGTAAGA CCATCAAAGG TGTTATCAAT TTTGACAAAG CGCCTGCAGA AGCAATGCTG AAAGTAGGTA TTTCTCCTGT AAGCAGCGAG AATGCGCTGG CTAACATCAA CAGTGAGATC CCTTCCTGGG ATTTTGCAGG TACGGTGAAA ACAGCTACCG GCAAATGGAA CAAGGAATTG TCCAAGATCC AGCTGCAAAC AAAAGATACT GCCAACAGAA GCATTTTCTA TACAGCCATG TATCATACAA TGATTGGTCC GGCACTGTTC AATGACCATG ACCGTTCTTA CCGGGGTACT GATAAAAAAG CATATCCTAA TCCGGGTTTT GACAACTACA CTGTTTTCTC CCTGTGGGAT ATCTACCGCT CATGTGCGCC ACTGTATACC CTGACACAGC CAGAGAGAGT GAGCAGTTTT GTAAACTCTA TGCTGACGAT CTACAAACAG CAGGGTAAAC TGCCTATCTG GCCACTGGTA GGTAGCGAAA CGAACTGTAT GGTGGGTTAT CATGCGGTAC CGGTTATTGC TGACGCTTAC CTGAAAGGTT ACAAAGGCTT TAATATCAAT GAAGCGTTTG ACGCCATGAA GGCTTCTGCT ACCAGAGATG ATCTGGGCAT GAAGGATATC AAGGCAAAAG GATACATTCC TGCTGATAAA GAATACGAAT CTGTATCCAA AGCGATGGAA TATGCGATTG ACGACTGGTG TATTGCTGCT GTAGCTAAAA AGCTGGGCCG CGCTGCTGAT TTCGAATATT TTTCCAAACG TGCAGGTTAT TATAAAAACT ACTTCGACAG CACTATCAAG TTTGTGCGTC CAAGAATGGA TGACGGTAGC TTCAAAACGC CGTACGATCC GTTCCATTCC ATCCATGAGA AAGGTGACTT CACTGAAGGT AATGGCTGGC AGTACACCTG GCTGGTACCA CAGGATGTGG AAGGTCTGAT CAGCCTGATG GGTGGTGATG ATGCTTTCAC CAAAAAACTG GACAGTCTGT TTGTGGCAAG CGGCGACATG GGTGCAGAAG CATCTAATGA TATTTCCGGT CTGATTGGTA TGTATGCACA TGGTAATGAG CCAAGCCATC ACGTAACTTA CATGTATGCT TATGCTGGTA ACCAGTGGAA AACATCCGAG AAGGTAAGAC AGGTGATGAG AGACTTCTAT ACTACCACTC CGGAAGGGCT GGCTGGTAAC GAGGACGTAG GCGCGATGTC TTCCTGGTAT GTACTGTCTT CTCTAGGCTT CTATCCTGTA AATCCTGCAA AAGGGATTTA TGTGTTTGGT AGTCCGCTGT TTGAAAAAGC CAGTCTGAAA GTACAAGGTG GTAAAACTTT CAACGTTGAA ACCGTCAACA ACAGCGCTGA GAACATTTAC ATCCAGCAGA TTACGCTGAA TGGCAAGCCA TACAAAAACA GCTATATCCG TCACGCGGAT ATCCAGAAAG GAGGTAACCT GAAGATCACC ATGGGTAACA AGCCTAATTA TGATTTCGGT AAAGCGGTGG CTAACCGTCC CGATTCAAAA TACTAA
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Protein sequence | MQLGLKHYPV LAASLLLAGM QVNGQDKKPT FTSGKEFKPS EYVNPYIGTG GHGHVFLGAS VPFGAVQVGP TNIVKGWDWC SGYHYSDSVV IGFPQMHLSG TGIGDLGDVL IMPYTGKIRT NHGSQENPTS GYGSHYTHAH ETAKPGYYAV QLEDYNIKVE LTASERVGFH KYTFPAGQEG HIIIDLKEGI GWDAPVETFI QKKDEYTLVG YRYSKGWAED QRLWFAIKSN VPVKDFVVFD GDKQLSGTEG KGKTIKGVIN FDKAPAEAML KVGISPVSSE NALANINSEI PSWDFAGTVK TATGKWNKEL SKIQLQTKDT ANRSIFYTAM YHTMIGPALF NDHDRSYRGT DKKAYPNPGF DNYTVFSLWD IYRSCAPLYT LTQPERVSSF VNSMLTIYKQ QGKLPIWPLV GSETNCMVGY HAVPVIADAY LKGYKGFNIN EAFDAMKASA TRDDLGMKDI KAKGYIPADK EYESVSKAME YAIDDWCIAA VAKKLGRAAD FEYFSKRAGY YKNYFDSTIK FVRPRMDDGS FKTPYDPFHS IHEKGDFTEG NGWQYTWLVP QDVEGLISLM GGDDAFTKKL DSLFVASGDM GAEASNDISG LIGMYAHGNE PSHHVTYMYA YAGNQWKTSE KVRQVMRDFY TTTPEGLAGN EDVGAMSSWY VLSSLGFYPV NPAKGIYVFG SPLFEKASLK VQGGKTFNVE TVNNSAENIY IQQITLNGKP YKNSYIRHAD IQKGGNLKIT MGNKPNYDFG KAVANRPDSK Y
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