| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3975 |
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| Symbol | |
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| ID | 8360148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4939653 |
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| End bp | 4942733 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966149 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003123638 |
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| Protein GI | 256422985 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0116692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.107099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA TTTTACTCAT TTTACTTGTC CCCATTTTTG TTTGTTCGAG CTTCATCGCA
AGAGCACAAT CTGGTCTGAC AGGCTTCAAC TACCAGGCTC TCGCCAGAAC TTCCAATCAG
GGCGAACCCT TAAAACTGCA AGCTATCCAG GTCAGATTCA GTGTCCTTAG CGGAAGCCCT
GACGGACCTG CAATTTATGT GGAGAAACAG ACCGCTGTGA CCAACTCACA GGGTTTGTTC
AACCTGATTA TTGGTCAGGG TACTGTAGAA ACCGGCTCCT TCGCGACGAT TCCCTGGAGT
GCGGCTAACC AGTATCTGAA AGTCGAACTG GACAAAAATG GTAACAACGA CTTTGTTCCC
ATCGGATCAA TGCCTTTTAT GGCCGTTCCG TATGCATTGT ATGCTGTAAA CGGCGGCACT
GGCGGCGGCG GTGGTCCAAC TGTCAACGTA GTATGGCTCG GTACATTGAG CTCCGCTCCT
GTAGCTCCGG CAGCTGGTAA TGCGTATTAT AACAGTACAG ACAAAAAATC TTACATCTAC
GATACCAACC TCCAGCCACA GATCATGTCG CAGGACGGTA CCAATGGCAC TGACGGCCTT
CCTGGTCCTG CGCTCTCCTG GTTAGGTTCC TTCACAGCTG AACCGACTCC AAGCGGCGCT
AATCAGGCAT ATTACAATAT GACCGATAAA AAAGCCTACA TCTACGACGG TTCTGCATGG
CAGATCTTCG CAGAAAGTGG CGTAGATGGT ACAAATGGCG TAGGTACGGG CGTAAGCTGG
TTAGGTTCCC TGGCCGCAGC TCCTGCTACT CCGACGATCA ACCAGGCTTA TTACAATACA
ATAGATAAGA AATCCTACAT CTACGACAGC ACCAGCACCT GGCAGCTCCT TGCACAGGAT
GGTGCAGACG GTGTTGCAGG TGTGACCGGT AAAGATGGTA TCTCCATCTC CTGGCAGGGT
ACACTGGCGA CAGCGCCAGC TACGCCTTCC CTTAACATGG CTTACTATAA CAGCGCCGAT
AAGAAAGCAT ATATATATGA TAGCCTCGGT ACCTGGCAGG TACTCGCACA GGATGGTACA
ATCGGTAAAG ATGGCGCCTC TATCAGCTGG CAGGGTTCAA TGGCGGCAGC GCCGGCCAGC
CCTTCCCTCA ACTGGGCTTA TTATAACAGC ACCGACAGAA CAGCTTATAT ATATGACAGC
ACCGGTACAT GGAAAGTACT GGCTGAAGGT GGTACAGGCT GGAATCTTTC TCACCTGGAG
TTCAAAGCAG ATGGCTCTAT CGGACTTGCC ACCACTGCTG ATACAGATAC GTTAAAATCC
GCCAACAGGG CATGGCTGAT CAGAGGTAAC TCAGATAGCA ACCCTGCACT CGATTTTATC
GGTACTACAG ACGATAATCC TTTCATCATT AAGGCAGGTG GTACAGGTCC GCAGTTTGAA
AAAATGCGCA TCTTCCCTGA TAAACCACAG ATCATTGTAA ATGGTACAGA CGATGCGGGT
ACCTCTCTCG GTAAAGGTGT ATTCACTGTA TTCTCCGGAG ACCACTCTAC CGGCATTGTA
AATGACGAAC CTATCTATAC AAACGCGATC ATCGGTTACG CCAATAGCGG TACCGGCGCC
GGTGTAGCGG GTTACAACGC CAGTAACGGT TACGGAGTAA AAGGTTTCAC ACAGGTAGGT
TCGGGTATAT ATGGTTCCGG TACCACACGT TTCAATGAAG GGGTAAGGGG CTATAACTCT
TCTACCAGTG GTGGTTTGGG TGTGATCGGT ATGACCAACT CCCCTTATAA AGCCACTAAT
ACCTTCCGTT CCGGCGGTGT GTTAGGTATG TCTACACACG GTACTGGTGT GGGTGTAGTA
GGTGCGGGTA ACAATGTTGA CTACCAGACT ATTACCAACA CCCCTGAAAT TGGCGGCGGT
GTGATGGGAA TTGGTACACG CGTTGGTACA ATCGGTTTTG GTAGCACTGC TGCCTCTGGT
GTAGGTGTAA TGGGTGTCGG TAATAACCAG GTAACCGTAA TTCCAGCGCA CGGTGGTGCT
GGTGTAGTAG GTGTTGCCGG TGGTACAGGC GCCAGCCAAT ATGCGGGGGT AGGTGTGATT
GGTTTTGCAA AAGGTCTCGC TACAGATGTT GAACGTTGGG GTGGTGTATT CGAATTCGGT
ACCTCCGCTT CAGTTGTGCA TACTTATACT TACCTCGCAG GTGCTAATTC AAGCGGCATG
TACGGTATGA TCTCCAACGG TACAAAATCT ACAGTGGTGA AAGACCAGGC TGGCGAAAAC
CGCCTCCTGT TCTGTACAGA AGCTCCAGAA GTATTGTTCC AGGACTTCGG TACCGGCGAA
CTGCAAAACG GTGCCGCACA CATCGACCTC GAAGATCTGC TCGCAAAAGT AATCCGCGTC
GATGCAAAAC ACCCGATGAA AGTATTTATC CAGCTGGAAG GCGAATGTAA TGGTGTATAT
GTCACCAACA AATCCGCTAA AGGCTTCGAC GTAAAAGAGT TACAGGGCGG TAAAGCAAAT
GTGCCTTTCA CCTGGCAGAT CGTTGCTTCC CGTGCTGATG AAGTACTGGC TGACGGTACC
GTACTGCCTT ACTCCGACAG ACGTTTCCCT GTAGGTCCTG GTCCTTTACC AATGACCGAC
TTGACTCCAT CTGCTGATTC AGCTGCTGCT GCCACTCCGG CAAAACCAGC TATGAAAACA
GTAGAACTGA AAAAGAACGA AAAAGAAGTA GTAAATAAAG CATTCTCCAA TCTTCAGTTT
GCAAGTGCAA AAGCTGAAAT CGCAGTTTCT TCCCTGCCTT CCCTCGACAA AATGGCTGCT
TTACTGCAGG CACATCGTGA ATGGCAGCTG CTGCTGAGCG GCCACACGGA CAACGAAGGC
ACGGAAACAT TTAACCAGAC TTTATCAGAA AAAAGAAGTG AAGCAGTAAG ACAATACCTC
GTTACCAAAG GTGTTGATGC TGAAAGAATT ACCACCAAAG GCTATGGTCA GTCCAAACCA
CTTACTACTA ACAGTAGCGA AGCTGGCAGA GGAAAGAACA GAAGAGTTGA GATGGAAATC
TTCACTGCCG AAAAACCTTG A
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| Protein sequence | MKAILLILLV PIFVCSSFIA RAQSGLTGFN YQALARTSNQ GEPLKLQAIQ VRFSVLSGSP
DGPAIYVEKQ TAVTNSQGLF NLIIGQGTVE TGSFATIPWS AANQYLKVEL DKNGNNDFVP
IGSMPFMAVP YALYAVNGGT GGGGGPTVNV VWLGTLSSAP VAPAAGNAYY NSTDKKSYIY
DTNLQPQIMS QDGTNGTDGL PGPALSWLGS FTAEPTPSGA NQAYYNMTDK KAYIYDGSAW
QIFAESGVDG TNGVGTGVSW LGSLAAAPAT PTINQAYYNT IDKKSYIYDS TSTWQLLAQD
GADGVAGVTG KDGISISWQG TLATAPATPS LNMAYYNSAD KKAYIYDSLG TWQVLAQDGT
IGKDGASISW QGSMAAAPAS PSLNWAYYNS TDRTAYIYDS TGTWKVLAEG GTGWNLSHLE
FKADGSIGLA TTADTDTLKS ANRAWLIRGN SDSNPALDFI GTTDDNPFII KAGGTGPQFE
KMRIFPDKPQ IIVNGTDDAG TSLGKGVFTV FSGDHSTGIV NDEPIYTNAI IGYANSGTGA
GVAGYNASNG YGVKGFTQVG SGIYGSGTTR FNEGVRGYNS STSGGLGVIG MTNSPYKATN
TFRSGGVLGM STHGTGVGVV GAGNNVDYQT ITNTPEIGGG VMGIGTRVGT IGFGSTAASG
VGVMGVGNNQ VTVIPAHGGA GVVGVAGGTG ASQYAGVGVI GFAKGLATDV ERWGGVFEFG
TSASVVHTYT YLAGANSSGM YGMISNGTKS TVVKDQAGEN RLLFCTEAPE VLFQDFGTGE
LQNGAAHIDL EDLLAKVIRV DAKHPMKVFI QLEGECNGVY VTNKSAKGFD VKELQGGKAN
VPFTWQIVAS RADEVLADGT VLPYSDRRFP VGPGPLPMTD LTPSADSAAA ATPAKPAMKT
VELKKNEKEV VNKAFSNLQF ASAKAEIAVS SLPSLDKMAA LLQAHREWQL LLSGHTDNEG
TETFNQTLSE KRSEAVRQYL VTKGVDAERI TTKGYGQSKP LTTNSSEAGR GKNRRVEMEI
FTAEKP
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