| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3972 |
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| Symbol | |
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| ID | 8360145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4937528 |
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| End bp | 4938619 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966146 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003123635 |
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| Protein GI | 256422982 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0682489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.528998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAGA ATTTACAGAA AGATCTTCAT TTACCGCCGA TTGTATGGAA CATTTTGCTT
GGCTGTGCCG CACTGATTAC GGGTTTTCTT TTTAAATACC TGCTGGCGCT CATCCTGAAA
CTGACGGCCG GTAAGAATGC AACGGATTAT TCCCTGATCA GGTCTATCCT GAAAAGACTG
GGAAAACCGA TCAATTATTT TTTGCCGGTG CTGGTGTTGG ACATGGTATT GCCGTTTATG
GAACTGGCAA AAAAGCCCAT GGATGTATTG AGTCGTATTG TGGAGATCTC GCTGATTGTT
TCCTTTGGAT TGATCCTGAC CGGACTGGTA AAGGTATTTG AGGATTATGT GATGCACGCC
TATGACCTGA AAAAAGAGGA TAATCTGCGG GAGCGGAAGA TGCGTACGCA GTTGCAGTTT
GTACGTAAAC TGACTATTAG TATGATCCTG GTGCTGACTT TGTGTGCGGT GTTGCTGAGT
TTTGACAGTC TGCGGAAGAT TGGCGCGGGA CTTCTGACCG GTGTGGGCGT CGGTGGTATT
ATTGTGGGTT TTGCGGCGCA ACGTTCCCTG TCTAATTTCC TGGCGGGGAT GCAGCTGGCT
TTTACGCAGC CGATCCGTAT TGACGATGTA CTGGTAGTGG AAGGAGAGTG GGGGCGGGTA
GAAGAGATCA CCCTGACTTA TGTGGTACTG GGTATCTGGG ATCAGCGTAA ACTGATTTTA
CCGATCAACT ATTTTATAGA AAAGCCTTTT CAGAACTGGA CACGTACGGG GTCGGCGATA
TTGGGGACGG CTTTCCTGTA CCTGGACTAT ACAGCGCCTA TTGATATACT CCGTGCGGAG
TTTGAGCGGA TCTTAAAAGA TCACCCGTTA TGGGATAAGC GGGTGCAGGT GATGCAGGTC
ACCAACATTA CCGACCGTTC TGTGGAAGTC AGAATGCTGG TGAGTGCGAA CAGTTCGGGC
AAAGCATTCG ATTTGCGCTG TTTTCTGCGG GAAAACATGT TGTCCTTTAT ACAGGCCAAT
CATGCTTACT GTCTGCCGAA AACGCGTGCT TTACTGGAAG AAAATGAGCA GAAATTACTG
GCTCAGGGAT GA
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| Protein sequence | MLENLQKDLH LPPIVWNILL GCAALITGFL FKYLLALILK LTAGKNATDY SLIRSILKRL
GKPINYFLPV LVLDMVLPFM ELAKKPMDVL SRIVEISLIV SFGLILTGLV KVFEDYVMHA
YDLKKEDNLR ERKMRTQLQF VRKLTISMIL VLTLCAVLLS FDSLRKIGAG LLTGVGVGGI
IVGFAAQRSL SNFLAGMQLA FTQPIRIDDV LVVEGEWGRV EEITLTYVVL GIWDQRKLIL
PINYFIEKPF QNWTRTGSAI LGTAFLYLDY TAPIDILRAE FERILKDHPL WDKRVQVMQV
TNITDRSVEV RMLVSANSSG KAFDLRCFLR ENMLSFIQAN HAYCLPKTRA LLEENEQKLL
AQG
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