| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3971 |
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| Symbol | |
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| ID | 8360144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4936081 |
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| End bp | 4937415 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966145 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003123634 |
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| Protein GI | 256422981 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.160795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.568065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATTTTG ATGAATTTGA CCTGGACGAC AGGGTCCTGG ATGGAATAGA TGCGATGGGA
TATACGACGG CGACGCCAGT CCAGGAAAAA GTTATCCCCC CGATTATAGC AGGTAAGGAC
ATTCTGGCCT GTGCCCAGAC CGGCACCGGT AAAACAGCCG CTTTTCTGCT GCCTATACTG
CACCGCTTAA TCACTGAGCC CCATGATGCA CGTAAAATCA ACTCACTGAT TATAGTACCG
ACCCGTGAAC TGGCAGTCCA GATTGCCCAG ACACTGGAGG GTATGTCTTA TTTTACCTCC
GTCAGCTCTA TCGCCGTATA CGGTGGCAGC AACGGCGCCC TGTTTGCCGC CGAGAAAAAG
GCACTGACCT CCGGCGTGGA TATCGTGATC TGCACCCCCG GTCGTATGAT CGCCCACCTG
AACATGGGCT ACGTAAAGCT GGACGCAGTA AAATACCTCG TGCTGGATGA AGCAGACCGT
ATGCTGGACA TGGGTTTCAG CGATGATATC ATCAGGATCA CGTCTACCCT GCCAAAGGAA
AGACAAAACC TGCTGTTCTC CGCTACCATG CCCGATAAGA TCCGCAAACT GGCCCTGAAG
ATCCTCCATC AGCCGGAAGA GATCAATATC GCCATTTCCA AACCGCCTGA AAAGATCGTA
CAGGAAGCTT TTGTCGTATT TGAAGAACAA AAGACCGGCT TGATCAAACA GCTCCTGGCA
CGCAAGGAAT TCGGCTGTAT TATTATCTTC TGCTCCCGTA AGCAGAACGT AAAACAGCTG
ACCTACGAGC TTAAAAAGGC CCGTTTCTCC GTAGAAGAGA TCCACTCTGA CCTGGAACAG
GATAAGCGCG AGCAGGTGCT CATGGATTTC AAAAACAAGA AACTGAAAAT GCTGGTGGCT
ACCGATATCC TGAGCCGCGG TATAGATATA GAAGATATTG ACCTGGTTAT TAATTATGAC
GTGCCAAATG ACGCAGAGGA TTATATCCAC CGTATCGGCC GTACCGCCAG GGCGGCGACC
GATGGTACCG CATATACCAT TATCAGCGAA AAGGAACAGC GCAAATTTGC CCGTATTGAA
GAAGTACTGG GTAAACCGGT GACCAAAGCC GAAGTACCGG CTGCATTAGG TCCGGTGCCG
GAATACTCCC CTAAACCATT CCGCTCAGGT GGCGGCAAAC GTCCGCAAGG TAAAAAACGC
CCGGGGGGCG GGGGCGGCGG TAACCGTAAT CATAGCAAAC CAGGGGGAAA CCAGGGTCCG
CGTCCACAAG GAGGGCACCC ACAGCACCAT AAAAGCAAAA ATAACAGCGG CGGCAAACCT
GCCACCCAAC CATAA
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| Protein sequence | MYFDEFDLDD RVLDGIDAMG YTTATPVQEK VIPPIIAGKD ILACAQTGTG KTAAFLLPIL
HRLITEPHDA RKINSLIIVP TRELAVQIAQ TLEGMSYFTS VSSIAVYGGS NGALFAAEKK
ALTSGVDIVI CTPGRMIAHL NMGYVKLDAV KYLVLDEADR MLDMGFSDDI IRITSTLPKE
RQNLLFSATM PDKIRKLALK ILHQPEEINI AISKPPEKIV QEAFVVFEEQ KTGLIKQLLA
RKEFGCIIIF CSRKQNVKQL TYELKKARFS VEEIHSDLEQ DKREQVLMDF KNKKLKMLVA
TDILSRGIDI EDIDLVINYD VPNDAEDYIH RIGRTARAAT DGTAYTIISE KEQRKFARIE
EVLGKPVTKA EVPAALGPVP EYSPKPFRSG GGKRPQGKKR PGGGGGGNRN HSKPGGNQGP
RPQGGHPQHH KSKNNSGGKP ATQP
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