| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3969 |
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| Symbol | |
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| ID | 8360142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4934092 |
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| End bp | 4935264 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966143 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_003123632 |
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| Protein GI | 256422979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0456821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.400999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TTATCGCAAT ACACCTTCAT AACGACAGAC ACGGTAACAC CATGGTGTTC
CGTCAGTCAC TGGAAACATT AACAGAGAAA GGTCTGGATG TACATCTTAT CACGAATCGT
ACCGGTGATA CGCCTGGATT CCTGTCCGGT ATTCCAGGTG TACAATACCA CTACATAAAT
TATTTAGAAC GGGGGAACAA ATGGCGTGTA TTCTTCAGTT TCCTGCTGGC TCAGATGGTT
ATTTTCAGGA AAGTCTGGGG GCTGCTAGAG CCGGAAGCAA AAGTGTACAT CAATACACTA
CTGCCTTTCG GTGCAGCATG GGCTGGCAGG CTGAAGAAAA CGCCGATTAC CTATCACATT
CACGAAACGG CTATCGCTTT TCCAACACTG CGCTCGTTCC TGCTGAATAC GGCCAGACGC
ACGGCCACAC AGGTAGTTTT TGGCTCCCGT TATCTACAGG CAAAATTCAG TTTCCCGAAA
GCGGAAAAAC ATATCGTACA CAGCTGTCTG CCACAGTCTT TCGTACAGGA AGCCGTATTG
CACGCCAATC ATGGCTCCCG GAAGACCGTA CTGATGATCG CACCGCTGGA GAAGGAAAGC
GGGTTACCAG AACTACTCGA ACTGGCGAAC CAGATGTCTT CCACAAAATT TGAACTCGTT
ATTGACGCAA GTCAGAAAGA AATTGACGCT TATTTCCATA ACTATTTTAT CCCTGACAAT
CTGATGGTCT ATGGCACACA GCTGAATCTG CATCCTTTTT ACCAGCGGGC AGCTGTGGTC
CTGAACCTCT CTAACACAGA GCACTACCAG GATACTTTCG ACTTCAACAT CCTGCAGGCA
ATGAGTTACG GACGCCCGGT GATCGTACCG CTTGCCGGAG GCGCGAACGA ACTGGTTGCA
CACGGATGGA ACGGCTATCG CATCAGCGGC AATTACATCG ATAAAGTGCG CAAACACGTA
GAACAGCTGC TGAGCAACAA ACCGCTGTAC GCCGACATGA GCTGTGCCGC ACAACTGGTT
GCCTTTCAGT TCAAACCTGA ATTCTTTAAG CAGCAGGTAG AAGACCTCTT TGCAGACGGC
ACTTACTTTA CGCCGCGTAA AAAGGAACAA CTCGCAGAAG TACTGCTCTA CCCTGCCGCA
CTACAGGAAT ACATCAATAA TGCAAGAAAC TAG
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| Protein sequence | MKKIIAIHLH NDRHGNTMVF RQSLETLTEK GLDVHLITNR TGDTPGFLSG IPGVQYHYIN
YLERGNKWRV FFSFLLAQMV IFRKVWGLLE PEAKVYINTL LPFGAAWAGR LKKTPITYHI
HETAIAFPTL RSFLLNTARR TATQVVFGSR YLQAKFSFPK AEKHIVHSCL PQSFVQEAVL
HANHGSRKTV LMIAPLEKES GLPELLELAN QMSSTKFELV IDASQKEIDA YFHNYFIPDN
LMVYGTQLNL HPFYQRAAVV LNLSNTEHYQ DTFDFNILQA MSYGRPVIVP LAGGANELVA
HGWNGYRISG NYIDKVRKHV EQLLSNKPLY ADMSCAAQLV AFQFKPEFFK QQVEDLFADG
TYFTPRKKEQ LAEVLLYPAA LQEYINNARN
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