| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3968 |
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| Symbol | |
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| ID | 8360141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4931294 |
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| End bp | 4932652 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966142 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003123631 |
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| Protein GI | 256422978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.175456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.229204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATT TCAAGATTTT TATTGTTGAG GATGATAAGT GGTACGGAGG ATTATTGCAT
CATTACCTTA GTCAGAACCC CGACTACGAA GTAACCCTGA TTGGATCAGG CAAGGAATGC
CTGGCGCAAT TGCACCGGAA ACCGGATCTC GTGACCATTG ATTTCGGATT ACCCGATATG
AATGGAGAGG AATTGTACAA AAAGATCAAA CAGGCGCAAC CTAATCTGCC TGTGATCATT
ATCAGCGCAC AAGAAAAGAT TACTACTGCG GTAGACCTGC TCAAAATGGG TGCTGAAGAC
TATCTCGTCA AAGATGATAA TACCCAGCAA CTGCTGTGGA AAGCTATCAT CCGCCTGCGC
GAAAATACTT CCCTGAAAAA CGAGATATCC GAACTGAAAG CGGAACTGAA AACGAAATAT
GATTATTCCC GTTCCATTAT CGGAAACAGT CCCGCCCTGC AGACCGTCTT CAAAATGATC
GATAAAGCAG CTGGCTCCCT GATCAATGTA TCCGTTTCCG GAGAAACCGG TACGGGTAAA
GAACTGGTCG CCCGCGCGGT ACATTATAAT TCCGCCAGAA GCGGTCATGC TTTCGTTCCG
GTGAATATGG CGGCCATCCC AAGGGAACTC GTCGAAAGCG AACTGTTTGG CTACGAAAAA
GGCGCTTTCA CCGGCGCACA GAATAAAAAG ATCGGGCGCT TCGAAGAAGC CAACGGCGGT
ACCCTCTTCC TCGATGAAAT CGGGGAAATG GACCTCAATA TCCAGAGCAA GCTCTTACGC
GTACTCCAGG AAAAAGAACT CACCCGCCTT GGAGGTACCT CCAAAGTAAA ACTGGACTTC
CGCCTGGTAG TCGCTACGCA TAAAAACCTC GCAGAAGAAG TGAAAAAAGG AAACTTCCGC
GAAGACCTGT ACTATCGTAT CGTCGGTCTC CCGGTCACCC TTCCTCCCCT TCGCGAACGC
AAAGAAGATA TCCTGCTGCT CACACAGCAT TTCCTGACCG CTTACTGCAA AGAAAATAAG
GTCGCAGAGA TCAAAGTCTC TCCTGCCGCC AGGGATAAGC TGGTAAGCTA TGCCTATCCT
GGTAATATCC GCGAACTGAA ATCAGTCGTG GAACTCGCTG CAGTAATGTC TGAAAACAAC
TGCATTGAAC CGGAAGACAT TACCTTCCTC TCAGGTAATA ATCACGATGT GGATACCGTA
TTGAATACCG AACTGACATT ACGCGAATAC ACAAGACTGA TCATCCGTAA CTATCTTAAA
AGATATGACG ATAACGTACT GCTGGTAGCC GAAAAACTGG ATATCGGTAA GTCCACCATT
TATAAAATGT TACAGACAGG CGAAATAGAG GGCGCCTGA
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| Protein sequence | MLDFKIFIVE DDKWYGGLLH HYLSQNPDYE VTLIGSGKEC LAQLHRKPDL VTIDFGLPDM
NGEELYKKIK QAQPNLPVII ISAQEKITTA VDLLKMGAED YLVKDDNTQQ LLWKAIIRLR
ENTSLKNEIS ELKAELKTKY DYSRSIIGNS PALQTVFKMI DKAAGSLINV SVSGETGTGK
ELVARAVHYN SARSGHAFVP VNMAAIPREL VESELFGYEK GAFTGAQNKK IGRFEEANGG
TLFLDEIGEM DLNIQSKLLR VLQEKELTRL GGTSKVKLDF RLVVATHKNL AEEVKKGNFR
EDLYYRIVGL PVTLPPLRER KEDILLLTQH FLTAYCKENK VAEIKVSPAA RDKLVSYAYP
GNIRELKSVV ELAAVMSENN CIEPEDITFL SGNNHDVDTV LNTELTLREY TRLIIRNYLK
RYDDNVLLVA EKLDIGKSTI YKMLQTGEIE GA
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