Gene Cpin_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3957 
Symbol 
ID8360130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4919335 
End bp4919697 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content47% 
IMG OID644966131 
Productprotein of unknown function DUF1304 
Protein accessionYP_003123620 
Protein GI256422967 
COG category[S] Function unknown 
COG ID[COG3759] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.232243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCT TAATTAAATT TCTCATAGGC TTTTGTGCGC TGGAGCACCT ATACATCCTA 
TGGCTGGAAA TGTTCGCCTG GACCACAAAG GCGCCTAAAG TCTTCAAACA ACTGCCTGCA
CATCTCTTTG AACCTACCAA AACACTCGCT GGCAATCAGG GACTGTATAA CGGCTTTCTC
GCTGCAGGAC TGATCTGGTC ATTCTTTATT CAGGATGGCG AATGGTCCAT GCATGTCGCT
ACTTTCTTCC TCAGCTGCAT CGCCGTAGCA GGTATTTATG GCGCACTGAC AGCAGGCAAA
CGTATATTTT TCGTACAGGC ACTGCCAGCG CTGGTGACTT TATTGCTGAT AGTGCTGAGA
TAG
 
Protein sequence
MLILIKFLIG FCALEHLYIL WLEMFAWTTK APKVFKQLPA HLFEPTKTLA GNQGLYNGFL 
AAGLIWSFFI QDGEWSMHVA TFFLSCIAVA GIYGALTAGK RIFFVQALPA LVTLLLIVLR