| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3951 |
|---|
| Symbol | |
|---|
| ID | 8360124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4910480 |
|---|
| End bp | 4913182 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644966125 |
|---|
| Product | Aminopeptidase N-like protein |
|---|
| Protein accession | YP_003123614 |
|---|
| Protein GI | 256422961 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.823523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.346171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGTCG GACTCCCACC CAAAATGAAA CCCTTTATCC TTTTTTCGGC TTTGTGCTTA
AAGCGCTTTT GTTATATTTA TGGCTATTTC CAAATTGAAA CGCTAATGAC AATCAACAAA
ATCCTGCTTT GTTCAGGCGT CCTGCTGGCT TCCCTCGGGA ACGTCGCTGT GGGACAGACC
GCTACTTCGA AGTACGATCA GCATGAAGTT TTCGGCCCCC TGTTTTACCC TGCCAACGGT
AACGAGTATC GCAGTGCATC CGGCGCCCCT GGCCATAAAT ACTGGCAGAA CCGGGCGGAC
TATACGATCA ATGTTGTACT GGACACTGCC AGTCACCGCA TAGATGGTTC CGTTGCCATC
ACCTACAAAA ACAGCAGCCC GGACAAGTTA CCTTTCGTAT GGCTGCAGAT GGACCAGAAT
ATTTATAAGG AAGATTCCAG AGGAGCTGCT ACCAGCGTTG TTACAGGTGG CCGTTTTGCC
AACCGTAGTT ATACAGAAGG TTACAAAATC AAGTCTGTAA GCGTTGCTAT CGGCGGAAAG
AAAACCGAAG TAAAATACAC TGTTACCGAC ACACGTATGC AGGTGATCCT GCCGGAAGCC
CTGAAAGCAG AGGGCGGCGT GGCGAAAATA TACGTGGACT ACGCGTACGA AGTGCCACAG
TACGGTACTG ACCGTACCGG CCGTCTGAAA ACGAAATACG GCTGGGTATA TGAGATCGCG
CAGTGGTACC CGCGTATGGA AGTGTACGAC GACGTACTGG GCTGGAACTC TATCCCTTAT
CAGGGTGCTG CGGAGTTCTA CCTGGAGTAT GGCGACTTCG ATTATACCGT GACAGCGCCT
GCCGGTATGG TGGTAGCTGG ATCCGGTGCA CTCGTTAACG AAGCGCAGGT ACTGACCGCA
AAACAACAGG CACAGCTGGC GAAGGCGCGT AACAGCGACC AGACCGTAAT GATCAAGGAT
AGCGCAGAAG TAGCTGCTGC AAAACCAGGT ACAGGTATGC AGTCCTGGCA TTTCCAGTGC
AAAAATGCAC GCGACGTGTC CTGGGCGGCT TCTACCGCGT TCATCTGGGA TGCTGCCCGC
ATTAACCTGC CAAGCGGCAA GAAATGCCTG GCGCAGTCCG TATACCCTGT AGAAAGTATC
CAGACCAGCA ATGGCTGGCA GCGTTCTACC GAGTACGTAA AAGGCTCCAT TGAGTTCTAT
TCGAAACAAT GGTTTGAATA CACCTATCCG GTAGCGACTA ACGTAGCAGG TATCGTAGGT
GGTATGGAAT ATCCCGGTAT CGTATTCTGT TCCTACAGGA GCACCGGCGG CGGCTTATGG
GGTGTAACCG ATCACGAATT CGGTCACAAC TGGTTCCCGA TGATCGTTGG TTCAAACGAA
AGAAAATATG CCTGGATGGA TGAAGGTTTC AACACGTTCA TCAATGATGG TTCCAGCAAA
GCATTCAATA ACGGTGAATA CTATCAGAAG CAGCAGGGAC AATCTATGGG CCGTGCGATG
AGCGGAGATC CGATCATGAG TACTCCGGAC GTAATCCAGA GCAGCTACCT GGGTATCGCA
GCTTACTACA AACCTTCAAT GGGTCTGATG ATCCTGCGTG ATTATATCCT GGGTAAAGAG
CGCTTCGAAT ATGCCTTCCG TACCTACATC GATCGTTGGG CATTCAAACA TCCGACACCA
TGGGATTTCT TCCGCACGAT GGAAAACGTG GCAGGTGAAG ACCTGAGCTG GTTCTGGAGA
GGTTGGTACC TGAATTCCTG GAAATTGGAC CAGGCAGTGA AAGATGTAAA ATACGTGAGC
AACGATCCTT CTAAAGGAGC ACTGATCACG GTGGAAAACC TGGAGCAGAT GGCATTACCG
GTTATCCTGG CCATCACTGA CAGCAAAGGT AAAACGGACA CCGTAAAACT GCCGGCAGAA
GTATGGCAAC GTGGCGGTAC CTGGACCTTC AAATTTGAGT CAGATTCCAA ACTGACCAAA
GTAGTGATCG ATCCGGATAA GGCATTCCCT GACGTTGATC CATCCAATAA CGTATGGAGC
GGCTCCAGCA AGAAAGCGCC AGCCGGTCTG ACTGCCAATG AAGTACTGAA AAAATACTTA
CAGGCGATCG GCGGTACTGA TAAAATCCAG GCGATTAAAG ACCAGACCAT CTCTGCTACC
GGATCCGTAC AGGGTACCGA TATCAAGATG ACCAAGAAGA TCAAATCACC TAACAAATAC
CTGCTGGACG TATTCATCCC GATGATGAAC GTACACGCCA GCAAACTAAT TATCAACGGC
GACAGCATTA CCGCTATCCA GATGGGTACT CCGGTACCTT TGGATGCAGC AGCAAAAGAA
CGCGTAAAAG CAAACATGGT GCTGATTCCT GAACTGGACT ACCTGAAAGG TGGCGTTGAT
ATGCAACTGT CTCCTGAAAT CGTTACCGAC GATAATGGTA AAGACAACTA CCTGGTAACT
GTAAAAGAAG ATGAAACAAC CCGGACTGAA CTGTACTACG ATGTAGCAAC CGGATTGCTT
TCAAAAAAGA TCAGTTACAA TGGCGACCAG ATCACCGGTG CTATTGAAAC CAGCGAGTAT
AAAGAAGTAG GTGGCGTGAA ATTCCCATTC CTGCTGAAAA ATACCATTAG CGGACAACAA
GTTGATTTCA AGGTAGACGA TATTAAAGTG AACAGCGGTC TCACAGATGC TGATTTTAAA
TAA
|
|---|
| Protein sequence | MCVGLPPKMK PFILFSALCL KRFCYIYGYF QIETLMTINK ILLCSGVLLA SLGNVAVGQT
ATSKYDQHEV FGPLFYPANG NEYRSASGAP GHKYWQNRAD YTINVVLDTA SHRIDGSVAI
TYKNSSPDKL PFVWLQMDQN IYKEDSRGAA TSVVTGGRFA NRSYTEGYKI KSVSVAIGGK
KTEVKYTVTD TRMQVILPEA LKAEGGVAKI YVDYAYEVPQ YGTDRTGRLK TKYGWVYEIA
QWYPRMEVYD DVLGWNSIPY QGAAEFYLEY GDFDYTVTAP AGMVVAGSGA LVNEAQVLTA
KQQAQLAKAR NSDQTVMIKD SAEVAAAKPG TGMQSWHFQC KNARDVSWAA STAFIWDAAR
INLPSGKKCL AQSVYPVESI QTSNGWQRST EYVKGSIEFY SKQWFEYTYP VATNVAGIVG
GMEYPGIVFC SYRSTGGGLW GVTDHEFGHN WFPMIVGSNE RKYAWMDEGF NTFINDGSSK
AFNNGEYYQK QQGQSMGRAM SGDPIMSTPD VIQSSYLGIA AYYKPSMGLM ILRDYILGKE
RFEYAFRTYI DRWAFKHPTP WDFFRTMENV AGEDLSWFWR GWYLNSWKLD QAVKDVKYVS
NDPSKGALIT VENLEQMALP VILAITDSKG KTDTVKLPAE VWQRGGTWTF KFESDSKLTK
VVIDPDKAFP DVDPSNNVWS GSSKKAPAGL TANEVLKKYL QAIGGTDKIQ AIKDQTISAT
GSVQGTDIKM TKKIKSPNKY LLDVFIPMMN VHASKLIING DSITAIQMGT PVPLDAAAKE
RVKANMVLIP ELDYLKGGVD MQLSPEIVTD DNGKDNYLVT VKEDETTRTE LYYDVATGLL
SKKISYNGDQ ITGAIETSEY KEVGGVKFPF LLKNTISGQQ VDFKVDDIKV NSGLTDADFK
|
|---|
| |