Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3936 |
Symbol | |
ID | 8360109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4891122 |
End bp | 4891877 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966110 |
Product | hypothetical protein |
Protein accession | YP_003123599 |
Protein GI | 256422946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.186569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.167118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC CTGTATTTAA AACCGTTTTC AGACTTACCC TTGCCGCTGG CCTGTTTTCA GGTATCCTTT TCGCAGTTGC ATCCCCCACC GCGGGCAATC GTACCAGAGT AGTCGCATTG ACAGAGAATA AAGTGGGCGC CAGAATGGCC CTGTTCTCAC AGCTCAAACT TGACTCCCTC GGATTGTCTA AAGAAGCATT TGCTTTTGCG CTGGCAGGAA TGGAAAAACT CGCTAAGGAA GGTAAACTCA GCAATCCGGA TCTACTGACC ATTGCCGACT TCAGTTTGCC CTCCAGCAAG AAAAGACTGT TTGTGATCGA CCTGGCAAAA GGAGAAGTAT TGTTCAACAC ATTGGTATCT CATGGAAGGA ATTCCGGTAC CGAACTGGCA ACTAACTTTT CCAATGCGCC GGAGAGCTTT AAAAGCAGTT TAGGATTTTA TGTAACCGGC GCTACCTATA AAGGCGAACA TGGTTACTCG CTGCGCCTGG AAGGGGAAGA AAAAGGCATC AATGACAACG CGATGAGCCG CGGCATTGTA ATGCACAGCG CAGCTTATGT AAACGAACAG ATCGCAAAAT TACAGGGGTA TATCGGCCGT AGCCTGGGAT GCCCTGCGAT TCCGGAGAAG ATACACCGCC AGATTATTGA GGCGATTAAA AACGGCACCT GCCTGTTTTT ATATAGTCCG GATAAGGCGT ACATGGCCAA CTCTAAAATG CTGGCAACAC CGGAGATCGA TACGACGATC GCATAA
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Protein sequence | MKKPVFKTVF RLTLAAGLFS GILFAVASPT AGNRTRVVAL TENKVGARMA LFSQLKLDSL GLSKEAFAFA LAGMEKLAKE GKLSNPDLLT IADFSLPSSK KRLFVIDLAK GEVLFNTLVS HGRNSGTELA TNFSNAPESF KSSLGFYVTG ATYKGEHGYS LRLEGEEKGI NDNAMSRGIV MHSAAYVNEQ IAKLQGYIGR SLGCPAIPEK IHRQIIEAIK NGTCLFLYSP DKAYMANSKM LATPEIDTTI A
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