| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3909 |
|---|
| Symbol | |
|---|
| ID | 8360082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4861643 |
|---|
| End bp | 4862050 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644966083 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003123572 |
|---|
| Protein GI | 256422919 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.64728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00213432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCA AACACTACAT ACTGATACTT CTTTTCCTCT GGTGGCCGAT TAATAATCTT
CACCGGTTGT GGAATTCTGC ACCTGCGCAA TGGGTACACT GGTATCTGTT CAATGATGCA
GCGGAAGATA TTCAGTGGTA CGTACATGAC CTGGCTCAAA CGCTGTCATA TGCTTTGATC
TTCTGGGCTG TCTGGTTAAA AATGACCATT ACGACTAGGA GATCAGACGC TGATTATGAG
ATAATGGTTA CTGCGATTGC CATTATCCAG GCTATAGACA TTTTCCATTA CATCGGCTGG
CATAGAAGGA GCGAAGTTGT TCTGGCGATA GAAGGGCTAA TCCTGTGTGC AGCTGCTCTC
AAAATATTCA TTAAGTACAG AAAATCAATA CACCACAAAC ATGGATAG
|
|---|
| Protein sequence | MRRKHYILIL LFLWWPINNL HRLWNSAPAQ WVHWYLFNDA AEDIQWYVHD LAQTLSYALI
FWAVWLKMTI TTRRSDADYE IMVTAIAIIQ AIDIFHYIGW HRRSEVVLAI EGLILCAAAL
KIFIKYRKSI HHKHG
|
|---|
| |