Gene Cpin_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3896 
Symbol 
ID8360069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4847834 
End bp4848319 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID644966070 
Productphage protein, HK97 gp10 family 
Protein accessionYP_003123559 
Protein GI256422906 
COG category 
COG ID 
TIGRFAM ID[TIGR01725] phage protein, HK97 gp10 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0197617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTC CATTTATCGG TATACGTCTC GATGGTGCCA AAGGACTTAT AAAGGACTTG 
AAAAAGGTGC AGAAGGAAGT CAAGAGAAAT ATCGAGGCTG AGATAGAGGA TACCGCAAAG
ATGATAGTTG CTGCTGCGCA GGCAGATGTA CCAAGCAAGA CCGGGGCCTT GAGGAACTCT
ATAAAGTGGA GGAAGATCGG GGAATTAAGA TACGAGATAG TGGCAGAGGA GCATTATGCG
CCTTATGTCG AATTCGGGAC CGGTAAGCTG GTCGTTGTGC CGAAAGGACT GGAAGATTAT
GCAATCCAGT TTAAAGGGTT GGGTATAAAG GAAGTCAATC TGCACGCCCA TCCGTACCTG
TTCCCTGCCT ATGAAAGGCA TCGTGTGGAA CTGGTAAGAC GTATAAAGGC CCTACTTGAA
ATTGAGCGAT ATATCTCAGT GACAAGACCT GGACCATCAA ACATAACAGG GGTTACAACA
ATATGA
 
Protein sequence
MARPFIGIRL DGAKGLIKDL KKVQKEVKRN IEAEIEDTAK MIVAAAQADV PSKTGALRNS 
IKWRKIGELR YEIVAEEHYA PYVEFGTGKL VVVPKGLEDY AIQFKGLGIK EVNLHAHPYL
FPAYERHRVE LVRRIKALLE IERYISVTRP GPSNITGVTT I